DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kar and slc16a6b

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001352167.1 Gene:slc16a6b / 561766 ZFINID:ZDB-GENE-110208-3 Length:527 Species:Danio rerio


Alignment Length:557 Identity:123/557 - (22%)
Similarity:214/557 - (38%) Gaps:122/557 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 EPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTF 136
            |.|||| ..|:|..:.|......:|.|.|:|:   .|.|.:|:.  .|.:|:.:...::.:....
Zfish    15 EVPDGG-WGWMVAAAFFFVEVFTYGIIKTFGI---FLQDLMTEF--HETNSRVSWAVSICVFVMA 73

  Fly   137 LFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAI 201
            ..:.::..|:::.|.|.....||.|.:.|.:.::. |::|..:|.|.||:.|||..|.:.||:.|
Zfish    74 FTAPLSTLLSNRFGHRPVVMVGGFLISLGTITTAL-TQSIDEMYITMGIVAGLGYCLTFLPTVTI 137

  Fly   202 LGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLH 266
            |..||.:....|:...:.|.....:...|.::.|....|....|.::.::.|.||:|..:.||:.
Zfish   138 LSQYFSKRRSLVTSIASTGECFSMLAFAPAMNALKEQIGWRYCLMVIGVLQASIIVCGALLKPIV 202

  Fly   267 PPPEPPKKKPGRSRINLF---------------------LRSIINVEI----------------- 293
            ..|:|..::...|.:.:.                     ::||.:.::                 
Zfish   203 IKPKPATQEASTSPLKVLDSKYDAENEFTCTSFDSVDSGVQSISSSQVNLAKEQQKKEEEGESPE 267

  Fly   294 --WKRKR--------------------FVIWALCVPLALFGYFVPYVHMMQF-VKTTFPGEDVNL 335
              .|:|:                    |..:||....|..|:|.|.::::|. |......:....
Zfish   268 TPLKQKQEDSSVSRTKLLDFSVLRDASFNCYALFGLFATLGFFAPQIYIIQLSVSRGVSQKSATY 332

  Fly   336 PVMCIGITSGIGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLV---MG 397
            .:..:.:....|||..|.:.:...:.::|:..:..|      ||.|      :||.||.|   .|
Zfish   333 MLSAMAVAEIGGRLSMGWVLNRKPIRKIYILLICTV------LLCP------VLVVFTFVSEFWG 385

  Fly   398 LFD-GCFIS-LLGPIAY---------EICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTNS 451
            |.. .|... |||.:|.         ::.|....:.|:|..:.:.|.....|||:.|.:.|.||:
Zfish   386 LMSCSCLYGFLLGTVASSHIPMLAEDDVIGIQRMSSAVGVYVCIQSFAGLAGPPLGGFLVDQTNN 450

  Fly   452 Y--TLPLILAGLPPLLGSSLLFLIKCVKEEENGVSAPRAVVLANGDIEIAGNGHYRSAGTKSSAP 514
            |  ......||    :|...|||         |:..|....|..|.         |....:.||.
Zfish   451 YGSAFYSCAAG----MGVGALFL---------GLVRPAKTGLCFGK---------RKRKDQQSAD 493

  Fly   515 LMGATNGINGSAPASPTIQSNGHVDNGTGSYPDSPWP 551
            ...::.|.:.| ||. .::.:...||....  ..|||
Zfish   494 RDASSQGSDDS-PAD-FVEMDMETDNSPAK--SKPWP 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 96/454 (21%)
MFS_1 124..439 CDD:284993 76/389 (20%)
slc16a6bNP_001352167.1 2A0111 17..512 CDD:331689 117/537 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.