DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and slc16a3a

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001119873.1 Gene:slc16a3a / 561627 ZFINID:ZDB-GENE-061009-16 Length:501 Species:Danio rerio


Alignment Length:498 Identity:126/498 - (25%)
Similarity:209/498 - (41%) Gaps:75/498 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLF 138
            |||| ..|.|:...|:..|..:.|.....|....|. |...:|..:.:..::::.|:..||    
Zfish    16 PDGG-WGWAVLFGCFVITGFSYAFPKAVSVFFKELI-REFGVGYSDTAWISSILLAMLYGT---- 74

  Fly   139 STMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAILG 203
            ..:...|.::.|.|.....||:.::.|::|:||.| :|..:|...|::.|||.||.:.|:|.:|.
Zfish    75 GPLCSILVNRFGCRPVMLVGGLFASLGMILASFAT-SIIHIYLCTGVITGLGMALNFQPSLIMLN 138

  Fly   204 HYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLHPP 268
            .||.......:|...|||.|....|.|....|...||..|...|:..:......|..:.:||.||
Zfish   139 RYFSEKRPLANGLAAAGSPVALCCLSPLGQVLQYEYGWRGGFLILGGILLNCCACGALMRPLVPP 203

  Fly   269 --PEPP-------------KKKPGRSRINLFLRSIINVEIWKRKRFVIWALCVPLALFGYFVPYV 318
              .|.|             |.||          .:::..:::.:.|:|:.:...:.:.|.|||.|
Zfish   204 KSSEAPGIENAPDDGDKTVKPKP----------KLLDFSVFRDRGFLIYTIAASIMVLGLFVPPV 258

  Fly   319 HMMQFVKTTFPGEDVN--LPVMCIGITSGIGRLIFGVIADMPGVNR--MYLQQLSLVSIGLVTLL 379
            .::.:.| ....||..  |.:..:|......|...|:||.:..|..  :||...:|:..|:..|:
Zfish   259 FVVSYAK-ELGNEDTKSALLLSILGFIDIFARPTCGIIAGLQWVRPRCVYLFSFALIFNGITDLV 322

  Fly   380 LPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYE----ICGPSGATQAIGFLLGLSSIPLTVGPP 440
            ..|:..|..||.|.:..|:..|    ::|.:.:|    :.|....:.|||.:|.|.:|.:.||||
Zfish   323 GSLSKDYTSLVVFCIFFGISYG----MVGALQFEVLMAVVGTEKFSSAIGLVLMLEAIAVLVGPP 383

  Fly   441 VAGMIFDSTNSYTLPLILAGLPPLLGSSLLFLIK--CVKEEENGVSAPRAVVLANGDIEIAGNGH 503
            .||.:.|.|..|....:|||:..:|.:.:|.:..  |:|::.   .||.|..:.:|: .:....|
Zfish   384 SAGRLLDHTKKYMFVFLLAGIEVVLSALVLAICNFLCIKKKP---EAPDAAAVESGE-PVEEKNH 444

  Fly   504 YRSAGTKSSAPLMGATNGINGSAPASPTIQSNGHVDNGTGSYP 546
                                    :||......|..||....|
Zfish   445 ------------------------SSPPATEEPHTPNGNSEKP 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 104/400 (26%)
MFS_1 124..439 CDD:284993 87/337 (26%)
slc16a3aNP_001119873.1 2A0113 16..436 CDD:273325 118/444 (27%)
MFS 22..416 CDD:119392 109/414 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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