DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kar and slc16a12b

DIOPT Version :10

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001139286.1 Gene:slc16a12b / 449947 ZFINID:ZDB-GENE-050522-80 Length:488 Species:Danio rerio


Alignment Length:472 Identity:121/472 - (25%)
Similarity:206/472 - (43%) Gaps:71/472 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 GKEPPDGGARAWLVMVSAFL----------CNGIIF-----GFINTYGVIHSLLTDRLTKLGDPE 119
            |..||||| ..|:::...|:          |..|.|     .|...|                  
Zfish    20 GVLPPDGG-WGWMIVAGCFVVTVCTRAVTRCISIFFVEFQMHFAKDY------------------ 65

  Fly   120 ASSKAALIGALAIGTTFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYG 184
              |..|.|.:|...||.|.:.:...:.:::..|:....||.|::.||:||||.| ::..||.|.|
Zfish    66 --SGTAWIHSLVDCTTMLCAPLGSLIGNQLSCRIAVILGGFLASVGLVLSSFAT-SLEYLYATLG 127

  Fly   185 IMFGLGAALAYTPTLAILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMS 249
            ::.|||.||.|||.:|::|.||........|...:||.:.|.||.|.:..|:..|...|.|.|:.
Zfish   128 LLTGLGFALCYTPAIAMVGIYFCERKALAYGIAMSGSGIGTFILAPVVQLLIEHYSWRGALLILG 192

  Fly   250 LVSAFIILCSFVYKPL-------HPPP---------EPPKKKPGRSRI------NLFLRSIINVE 292
            .....:.:|..:.:|:       .|.|         :||....|.:|.      ....:|:....
Zfish   193 GFVLNLCVCGALLRPIILKEEEACPLPVDSECGYSVKPPTLNGGPTRSAASDAKQRCFQSMQEYH 257

  Fly   293 IWKRKRFVIWALCVPLALFGYFVPYVHMMQFVKTTFPGEDVNLPVMCI-GITSGIGRLIFGVIAD 356
            ......|::.|....|...|..:|:|:::.:......|......:|.| |:...:|.:.||.:.|
Zfish   258 FLLMPDFLVLAGSFLLLASGCSLPFVYLVPYALDVGVGHQHAAFLMSILGVIDIVGNITFGWLTD 322

  Fly   357 MPGV----NRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGP 417
            ...:    |..|:..:.:.  ||..|.:||..::|.||.|:::.|.|||.:::|:..:..::.|.
Zfish   323 RRCLKKYRNICYMFAVGME--GLCCLFIPLLRTFVWLVPFSVLYGYFDGAYVALIPVVTSDVVGR 385

  Fly   418 SGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTNSYTLPLILAGLPPLLGSSLLFLIKCVK----- 477
            ...:.|:|.:..|.::|..|.||:.|.:.|:|.:||....|:|...:..|.|||.:..::     
Zfish   386 QYLSSALGVVYFLHAVPYLVSPPIGGWLVDTTGTYTATFFLSGFALISSSLLLFSVAIIRYCQRN 450

  Fly   478 EEENGVSAPRAVVLANG 494
            :::|.:|....:|...|
Zfish   451 QKKNSLSKIPKLVSCEG 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS_MCT8_10 80..474 CDD:340978 111/435 (26%)
slc16a12bNP_001139286.1 MFS_MCT12 29..430 CDD:340982 107/423 (25%)

Return to query results.
Submit another query.