DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and slc16a12

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_989310.1 Gene:slc16a12 / 394932 XenbaseID:XB-GENE-1012784 Length:473 Species:Xenopus tropicalis


Alignment Length:497 Identity:126/497 - (25%)
Similarity:227/497 - (45%) Gaps:72/497 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RDIHGKEPPDGGARAWLVMVSAFL----------CNGIIFGFINTYGVIHSLLTDRLTKLGDPEA 120
            |::| |.||||| ..|::::..|.          |..|.|....:|..               :.
 Frog     6 RNLH-KAPPDGG-WGWMIVIGCFFVTVCTRAVTRCISIFFVEFQSYFA---------------QD 53

  Fly   121 SSKAALIGALAIGTTFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGI 185
            .::.|.|.::...:|.|.:.:...:::....::....||||::.||:||||.| ::..||.|.|:
 Frog    54 YARTAWIHSIVDCSTMLCAPIGSYVSNHFSCQVGIILGGVLASTGLVLSSFAT-SLEYLYLTLGV 117

  Fly   186 MFGLGAALAYTPTLAILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSL 250
            :.|||.||.|:|.:|::|.||::......|...:||.:.|.||.|.:..|:..:...|.|.|:..
 Frog   118 LTGLGFALCYSPAIAMVGKYFEKRKALAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGG 182

  Fly   251 VSAFIILCSFVYKP-------LHPP--PEPPKKKPGRS-RINLFLRSIINVEIWKR--------- 296
            ..:.:.:|..:.:|       ||.|  .|..:.:|.:| |::.....:......||         
 Frog   183 FVSNLCVCGALMRPITLKEDSLHYPLKQEQMENEPTQSGRLDSSCSPLCQDCSHKRLCYCTKKEY 247

  Fly   297 -----KRFVIWALCVPLALFGYFVPYVHMMQF-VKTTFPGEDVNLPVMCIGITSGIGRLIFGVIA 355
                 .:|::.|:......:|...|:|:::.: :......::....:..:||...:|.:.||.:.
 Frog   248 SFLLKPKFMVLAVSFLFLAYGCSPPFVYLVPYALNVGVSNQEAAFLMSILGIIDIVGNITFGWVT 312

  Fly   356 DMPGVNR-MYLQQLSLVSI-GLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPS 418
            |...:.: .|...|..|.: ||..|.||:...:.:||.|:::.|.|||.:::|:..:..::.|.|
 Frog   313 DTRFLKKHRYCCYLIAVGLDGLCCLFLPILTRFQLLVPFSVMFGYFDGAYVALIPVVTGDVVGTS 377

  Fly   419 GATQAIGFLLGLSSIPLTVGPPVAGMIFDSTNSYTLPLILAGLPPLLGSSLLFLIKCVKEEENGV 483
            ..:.|:|.:..|.::|..|.||:||.:.|:|..||...:|:|...:..:.||.|.|.:...:   
 Frog   378 SLSSALGVVFFLHAVPYLVSPPIAGWLVDTTGDYTAAFLLSGFSMIFCAVLLALAKIINRIK--- 439

  Fly   484 SAPRAVVLANGDI--EIAGNGHYRSAGTKSSAPLMGATNGIN 523
            ..|:||.:...||  ||..||.            :...|.||
 Frog   440 KRPKAVAVPTSDIKQEIWTNGD------------VSCANAIN 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 100/414 (24%)
MFS_1 124..439 CDD:284993 86/341 (25%)
slc16a12NP_989310.1 2A0111 12..444 CDD:331689 112/451 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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