DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kar and CG13907

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001286894.1 Gene:CG13907 / 38104 FlyBaseID:FBgn0035173 Length:816 Species:Drosophila melanogaster


Alignment Length:734 Identity:132/734 - (17%)
Similarity:205/734 - (27%) Gaps:336/734 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IHGK--EPPDGGARAWLVMVSAFLCNGIIFGFINTYGV--------IHSLLTDRLTKLGDPEASS 122
            ::|:  .||||| ..|::..::|:||.|:.|...|:|:        .|             |...
  Fly    64 VYGELPPPPDGG-YGWVICFASFMCNMIVDGIAYTFGIFLEEFVAYFH-------------EGKG 114

  Fly   123 KAALIGALAIGTTFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMF 187
            ..|.:|:|..|.......:...|.:|.|.|....||.:::....:||:|.| |:..|..|||.|.
  Fly   115 TVAWVGSLLSGVYLSAGPIVSALANKYGCRAVCIAGSIIACIAFVLSTFST-NVSMLMATYGFMG 178

  Fly   188 GLGAALAYTPTLAILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVS 252
            |.|..:.|.|.:..:|:||:......:|....||...|....|....||..||.:..|.|.   :
  Fly   179 GFGFGMIYLPAVVAVGYYFETKRSLATGIAVCGSGFGTFAFAPLATYLLEEYGWKNALLIF---A 240

  Fly   253 AFIILCSFVYKPLHPPPEPPKKK------------------------------------------ 275
            ..|:.|:.....:.|...|.|||                                          
  Fly   241 GLILNCAIFGAMMRPLTYPKKKKQKPLMQRMYEEKQLQLERGSFAGSHFMVQLPDGTIERKLKMP 305

  Fly   276 ----PG-RSRINLFL-------------------------------------------------- 285
                || .|.:||.|                                                  
  Fly   306 LNADPGVHSSLNLELLAQQAGGGGLHPVSTLPTITESKVVDVHRQNGAQSPPNGDSNGQLSARSA 370

  Fly   286 ----------------------------------------------------------------- 285
                                                                             
  Fly   371 AGAVGRRPHRNSESENSPYHSQDAMTRNASQPAFLAGDHQSLPKNGSVPAFNTRVRKTSASERFQ 435

  Fly   286 ----------------------------------------------------------------- 285
                                                                             
  Fly   436 PSLAAIRATSRGDLEAGAGGDFASSKLSLSQRQGGSQTGSSGRMVRPMSRKDIFYSGSVTNLPQY 500

  Fly   286 ------------------------------------------------------RSIIN----VE 292
                                                                  :|::|    |.
  Fly   501 QSQKSLANYRNSVLSLTKYEKSMQSVAKLDPLAEAEKHREEYDLCPCLGIPDSVKSVVNTMLDVS 565

  Fly   293 IWKRKRFVIWALCVPLALFGYFVPYVHMMQFVKT-TFPGEDVNLPVMCIGITSGIGRLIFGVIAD 356
            :.|...|::..:.....:.|.:||:|:::...|. ..|..|..:.:..||||:.:||:..|.:||
  Fly   566 LLKDPVFMLIGVSNIFGMAGLYVPFVYLVDAAKEHDIPKNDAAMLLSIIGITNTVGRVFCGWVAD 630

  Fly   357 MPGVNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGAT 421
            :|.||.:.|....|:...:...|.||..||...::.::..||....:|||...|..::.|....|
  Fly   631 LPQVNSLLLNNCCLLVSTIAVTLTPLCYSYAAYITMSIFFGLAISGYISLTSIILVDLLGLDKLT 695

  Fly   422 QAIGFLLGLSSIPLTVGPPVAGMIFDSTNSYTLPLILAGLPPLLGSSLL--FLIKCVK------- 477
            .|.|.|:........:|.|:||.|:|.|::|.||..:||  .|.|.|.:  ||..|:|       
  Fly   696 NAFGLLILFRGFAALIGTPLAGAIYDMTHTYDLPFYMAG--ALFGISTITSFLAPCLKRCSPSEE 758

  Fly   478 -----------EEENGVSA 485
                       :||.|..|
  Fly   759 TPVHVETLTPIDEEQGEDA 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 113/671 (17%)
MFS_1 124..439 CDD:284993 93/600 (16%)
CG13907NP_001286894.1 MFS 78..>258 CDD:119392 51/196 (26%)
MFS <570..748 CDD:119392 55/179 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I2205
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.