DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and slc16a1b

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_956379.1 Gene:slc16a1b / 368274 ZFINID:ZDB-GENE-030515-5 Length:461 Species:Danio rerio


Alignment Length:435 Identity:115/435 - (26%)
Similarity:193/435 - (44%) Gaps:37/435 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 GKEPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGT 134
            |..||:|| ..|.|:|.||:..|..:.|..:..|....:     ::.....||:.:.|.::.:..
Zfish    10 GYTPPEGG-WGWAVVVGAFISIGFSYAFPKSITVFFKEI-----EVIFNATSSQVSWISSIMLAV 68

  Fly   135 TFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTL 199
            .:....::..|.:|.|.|....|||.||..||:.:||| :.:..|||..|::.|||.|....|.|
Zfish    69 MYAGGPISSILVNKFGSRPIMIAGGCLSGTGLVAASFC-DTVEGLYFCVGVIGGLGLAFNLNPAL 132

  Fly   200 AILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILC--SFVY 262
            .::|.||.:.....:|...|||.||...|.|....|...:|..|:..|:.  .|.:..|  ..:.
Zfish   133 TMIGKYFYKRRPIANGIAMAGSPVFLSTLAPLNSWLFDQFGWRGSFLILG--GALLNCCVAGSLM 195

  Fly   263 KPLHPPPEP--PK---------KKPGRSRINLFLRSIINVEIWKRKRFVIWALCVPLALFGYFVP 316
            :|:.|.|:|  ||         ||.....||.||    ::.::..:.|:::.|...:..||.|.|
Zfish   196 RPIGPKPQPAIPKEDAEIKPQEKKTVMQTINGFL----DLTLFTHRGFLLYLLGNVIMFFGLFAP 256

  Fly   317 YVHMMQFVKTTFPGEDVNLPVMCI-GITSGIGRLIFGVIADMPGVNR--MYLQQLSLVSIGLVTL 378
            .|.:..:.|:....:|....::.| ..|..|.|...|::|:...|..  .|....|::..|:..|
Zfish   257 LVFLSNYAKSKHISKDKAAFLLSILAFTDMIARPSMGLVANTRWVRPRIQYFFAASVLYNGVCHL 321

  Fly   379 LLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAG 443
            |.||:..|:....:.:..|:..|...|:|.....::.|....:.|:|.:..:...|:.:|||:.|
Zfish   322 LAPLSTDYLGFAIYAVFFGVAFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECAPVLLGPPLLG 386

  Fly   444 MIFDSTNSYTLPLILAGLPPLLGSSLLF--------LIKCVKEEE 480
            .:.|..:.|.......|:..::.|..||        |:...|:||
Zfish   387 RLNDIYDDYKYTYQGCGIVLVIASIFLFVGMGINYRLVDKEKKEE 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 102/393 (26%)
MFS_1 124..439 CDD:284993 86/330 (26%)
slc16a1bNP_956379.1 2A0113 1..442 CDD:273325 115/435 (26%)
MFS 20..415 CDD:119392 105/406 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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