DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and chk

DIOPT Version :10

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_610230.3 Gene:chk / 35578 FlyBaseID:FBgn0033095 Length:894 Species:Drosophila melanogaster


Alignment Length:213 Identity:64/213 - (30%)
Similarity:99/213 - (46%) Gaps:22/213 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VQNGNG----------NANGTHIEAPCCRDIHGKEP--PDGGARAWLVMVSAFLCNGIIFGFINT 100
            :.||||          |.:|..|::   .....|.|  |||| ..|:|:.::.:.:.|..|...:
  Fly    98 LMNGNGQVKRRKRLISNESGDSIDS---SSTEKKTPKMPDGG-YGWVVVFASLVVSLIADGLSFS 158

  Fly   101 YGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLFSTMAGCLTDKIGLRLTTFAGGVLSAGG 165
            :|:|:   .:.|...|  |::||.|.|.:|......|...:...|.||.|.|..|..|||:||.|
  Fly   159 FGLIN---VELLEYFG--ESTSKTAWISSLFFSVPLLMGPIWSNLVDKYGCRKMTILGGVVSAFG 218

  Fly   166 LLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAILGHYFKRYLGKVSGFVTAGSSVFTVILPP 230
            ..||||| .:|..|..|:||:.|||..:.|...:..:..:|.:.....:|...:|:.:.|.:...
  Fly   219 FALSSFC-NSIEMLMVTFGIISGLGLGIGYVTAVVSIAFWFDKKRTFATGIGASGTGIGTFVYAR 282

  Fly   231 CLDKLLGSYGLEGTLRIM 248
            ....|:.|||..|...|:
  Fly   283 LTSYLIESYGWRGATLIL 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS_MCT8_10 80..474 CDD:340978 51/169 (30%)
chkNP_610230.3 MFS_MCT_SLC16 138..>315 CDD:340910 51/169 (30%)
MFS <687..869 CDD:475125
Blue background indicates that the domain is not in the aligned region.

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