DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and hrm

DIOPT Version :10

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster


Alignment Length:660 Identity:145/660 - (21%)
Similarity:227/660 - (34%) Gaps:218/660 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NGKDAMKPSAPVQNGNGNAN-GTHIEAPCCRDIHGKE----PPDGGARAWLVMVSAFLCNGIIFG 96
            |.::|.|.:......|||.| ..|...........||    ||||| ..|||::.:.|.|.:|.|
  Fly     8 NSQNASKINQKDHKPNGNTNESRHKTVSLINKKDDKEYDLVPPDGG-WGWLVLLGSCLTNILIPG 71

  Fly    97 FINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLFSTM---AGCLTDKIGLRLTTFAG 158
            .|.::||:.|..||...     .:.:|||.|.||..   ||:|::   :..|:.|...|..|..|
  Fly    72 TIKSFGVLFSEFTDAFN-----SSPTKAAWIPALCY---FLYSSLGPVSSILSVKYSYRTVTLLG 128

  Fly   159 GVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAILGHYFKRYLGKVSGFVTAGSSV 223
            |..::.|::| ||...:|..||.:||::.|:||.|::.||:.|:..||.:..|..:|...:||::
  Fly   129 GASASLGMIL-SFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLRGLANGLCISGSAL 192

  Fly   224 FTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLH---------------------- 266
            .::||||.|..||.:||..|:..||..::..:.:.:..|:|:.                      
  Fly   193 GSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRARQALENIPEEEDI 257

  Fly   267 -------------PPPEPPKKK-------------PGRSRINLFLRSIINV----------EIWK 295
                         |..||..|.             ||..|:. |:||....          |...
  Fly   258 GIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQ-FVRSASAAVVQSYSKSGDEFQS 321

  Fly   296 RKRFVIWALCVP-----------------------------LAL-------FGYFVPYVHMMQFV 324
            |.|.:...:.:|                             |.|       .....|......:|
  Fly   322 RSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYV 386

  Fly   325 KTTFPGE-------------------------------------DVN------------------ 334
            .|.:.|.                                     ||:                  
  Fly   387 STPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQAQQPQRSKFFDLSL 451

  Fly   335 --------------------------LP----------------VMCIGITSGIGRLIFGVIADM 357
                                      ||                :..:..|..|||:....::||
  Fly   452 LKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATDLIGRIGGSALSDM 516

  Fly   358 PGVNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQ 422
            ..:.:.:.....|...||...|||...:|..:..:..:.||..|.::.:...|..::.|....|.
  Fly   517 GYIPKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTS 581

  Fly   423 AIGFLLGLSSIPLTVGPPVAGMIFDSTNSYTLPLILA-GLPPLLGSSLLFLI------KCVKEEE 480
            :.|..|.::.:...||||:....|::.|.|. ||..| ||..|.|:||...:      |...||:
  Fly   582 SYGISLFVNGLLQLVGPPLCNYWFEAVNDYN-PLFHALGLTLLAGASLWSFMPWINRRKANAEEQ 645

  Fly   481 NGVSAPRAVV 490
            ......:|.|
  Fly   646 LDAQIEKAAV 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS_MCT8_10 80..474 CDD:340978 125/594 (21%)
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 62/184 (34%)
MFS <451..633 CDD:475125 39/182 (21%)

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