DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and out

DIOPT Version :10

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_573378.1 Gene:out / 32926 FlyBaseID:FBgn0259834 Length:655 Species:Drosophila melanogaster


Alignment Length:240 Identity:63/240 - (26%)
Similarity:103/240 - (42%) Gaps:30/240 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DAMKPSAPVQNGNGNANGTHIEAPCCRDIHGKEPPDGGARAWLVMVSAFLCNGIIFGFINTYGVI 104
            |..||..|.:....:.....:            .|||| ..|:|.::|.|.|..:|..:..||:|
  Fly    17 DTTKPKKPKRRDKSDLGPDFV------------APDGG-WGWVVCLAAGLNNFFLFPALQQYGLI 68

  Fly   105 HSLLTDRLTKLGDPEASSKAALIGALAIGTTFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLS 169
            :.:   |:..||.....:...:...:||.:  |...:.|.:..:...|.....|..|:..|:.||
  Fly    69 YRV---RMQSLGFDAKQTTTIVNVVMAISS--LVGIVNGAMFRRFTFRQVALTGTSLAFLGVFLS 128

  Fly   170 SFCTENIGALYFTYGI----MFGLGAALAYTPTLAILGHYFKRYLGKVSGFVTAGSSVFTVILPP 230
            :|||     .::.|.|    :||:|..||...|...:..|||....:.:||....:.:..:..|.
  Fly   129 AFCT-----TFWQYIICLSAIFGIGLGLAMAATSLAVNTYFKLKRRRATGFSWTITGLGPIFFPQ 188

  Fly   231 CLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPL--H-PPPEPP 272
            ....|||.||.:||:.|.:.::...|||:...:|:  | ..||.|
  Fly   189 VSTVLLGYYGAQGTILIYAGIAMNAILCALTLQPVLWHVKKPEKP 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS_MCT8_10 80..474 CDD:340978 55/200 (28%)
outNP_573378.1 MFS 44..>221 CDD:475125 50/186 (27%)
MFS <459..626 CDD:475125
Blue background indicates that the domain is not in the aligned region.

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