DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kar and CG8051

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001285434.1 Gene:CG8051 / 32925 FlyBaseID:FBgn0031012 Length:616 Species:Drosophila melanogaster


Alignment Length:599 Identity:110/599 - (18%)
Similarity:195/599 - (32%) Gaps:183/599 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NGHTASATNGLVHANGKDAMKPSAPVQNG------NGNANGTHIEAP------CCRDIHGKEP-- 73
            |.|..:..|     |..:|::...|.:..      ||:|..|.|..|      ....:..|.|  
  Fly     6 NNHNNNNNN-----NNDEALRLRLPEEQAEQLLPKNGSAGQTKIAPPTHTHSIAAASVPQKVPAK 65

  Fly    74 --------------PDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKA 124
                          |||| ..|||.|::.:...:.|.....:|:   |..||:..||  .:||:.
  Fly    66 KKRDKSDLGEDFVAPDGG-WGWLVSVASGVNILVTFALAQQFGI---LFRDRMAGLG--ISSSEL 124

  Fly   125 ALIGALAIGTTFLFSTMAGCLTDKIGLRLT----TFAGGVLSAGGLLLSSFCTENIGALYFTYGI 185
            ..|    |.|....|...|.|...:..|.|    ...|.||:..||....| .:.......::.|
  Fly   125 TTI----INTQIAVSAFTGLLNGPLFRRYTYRVVALVGSVLTFLGLFWMVF-ADTFAVYIMSFSI 184

  Fly   186 MFGLGAALAYTPTLAILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSL 250
            ::|.|..|..:.:...:..|||......:.|....:.:..::.|.....:|..:|::||..:.:.
  Fly   185 LYGFGRGLTVSASSLAVNTYFKVKRRTATAFQFGVAGLGPIVCPYFATYMLYEFGVQGTTLLFAG 249

  Fly   251 VSAFIILCSFVYKPLH----------------------------------PPPEP--PKKKPG-- 277
            .|...|.||.:|:|:.                                  .|..|  |:...|  
  Fly   250 ASLHTIACSLIYQPVKWHVVKRDRDAEALQQVQPLAEREDQDEDIIKNVVEPETPVLPRANDGWF 314

  Fly   278 -----------RSRINLF------------------------LRSII------------------ 289
                       |:|:|.:                        ||||.                  
  Fly   315 GSRASLNSVGTRNRLNTWEKSDSNGHVELKRLSSKDSNPGRQLRSISVSHSIKEEEATGYNSDHE 379

  Fly   290 ----------------NVEIWKRKRFVIWA------------------LCVPLALFGYF-VPYVH 319
                            ..|..:||:...:.                  |.|.:.|..:. :.:..
  Fly   380 VQHTELTEKEKQELEDEKERQRRKKLPFYMKVVIFFDMDLLRDITYVNLAVGITLINFVEINFAI 444

  Fly   320 MMQFVKTT--FPGEDVNLPVMCIGITSGIGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLLLPL 382
            :..|:.:.  |..:.:.|.:..:|....:.|.:..:|.....::......:.::.:.:..:.|.:
  Fly   445 LTPFILSDLGFNKDQIALAMSTLGFFDLVVRFLIPLITAKINLSNRTFFVVGILGMCIGRMFLSM 509

  Fly   383 TNSYVILVSFTLVMGL---FDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGM 444
            |:::.::::..|.:||   |...|.||:.|....:   .....|.|..|.:|.....:..|:.|:
  Fly   510 TSNFYVMMAIFLWLGLNKAFRTVFWSLIIPSYVPL---KRLPAAAGLQLLMSGTFSMIFGPLIGL 571

  Fly   445 IFDSTNSYTLPLIL 458
            |.|.| ||.:.|.|
  Fly   572 IRDHT-SYAVTLNL 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 92/513 (18%)
MFS_1 124..439 CDD:284993 70/449 (16%)
CG8051NP_001285434.1 MFS 86..>266 CDD:119392 46/189 (24%)
MFS <428..598 CDD:119392 32/161 (20%)
MFS_1 440..>572 CDD:284993 22/134 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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