DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kar and Mct1

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster


Alignment Length:583 Identity:117/583 - (20%)
Similarity:201/583 - (34%) Gaps:189/583 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 PPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFL 137
            ||||| ..|:|:..:|:.:.:..|...::|:.::...|...     |.....|.|.::.:|.||.
  Fly    28 PPDGG-WGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDYFN-----EGKGYTAWIASIMVGVTFS 86

  Fly   138 FSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAIL 202
            ...::....::.|.|..|.||.:|:|..:::|.| .:|:..|..|.|...|||..|.|.|.:..:
  Fly    87 SGPISSSFVNRYGCRAVTIAGSILAASCIIVSMF-AQNVLTLIITIGFGTGLGFGLIYLPAIVSV 150

  Fly   203 GHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLH- 266
            ..||:......:|....||...|.:..|..:.|:|:||..|.:.|:..:....|:...:::||. 
  Fly   151 TQYFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLIIGGIVLNCIIFGAMFRPLEL 215

  Fly   267 --PPPEPP---------KK---------------------------------------------- 274
              ||..||         ||                                              
  Fly   216 EAPPQTPPNTPSTPKLAKKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAVSGGALCRSNSV 280

  Fly   275 ----KPG---------------------------------------------------RSRINLF 284
                ||.                                                   ||.....
  Fly   281 GHNLKPNLNNNSNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRERSASGTM 345

  Fly   285 LR--------------------------------------------------------------- 286
            .|                                                               
  Fly   346 YRPDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKET 410

  Fly   287 -----SIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQFVKT-TFPGEDVNLPVMCIGITSG 345
                 .::|..:.|...|||:::.......|:.|||::::.:.:| .....|.:..:..||:.:.
  Fly   411 RDTFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANT 475

  Fly   346 IGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPI 410
            :||:|.|.|:|.|.|||:.:..:.|.:.|:.|.::||.:.:..|..:..|.|...|.::.|...|
  Fly   476 VGRIILGYISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVI 540

  Fly   411 AYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTNSYTLPLILAGLPPLLGSSLLFLI 473
            ..::.|....|.|.|.||....|...:|||:.|.::|.|:||....::|||...:...::|.|
  Fly   541 LVDLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAI 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 107/559 (19%)
MFS_1 124..439 CDD:284993 92/496 (19%)
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 45/183 (25%)
MFS <426..604 CDD:119392 52/178 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I2205
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm9209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.920

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