DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and Slc16a4

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001013935.1 Gene:Slc16a4 / 295356 RGDID:1359655 Length:500 Species:Rattus norvegicus


Alignment Length:479 Identity:109/479 - (22%)
Similarity:197/479 - (41%) Gaps:87/479 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 EPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTF 136
            :|.||| ..|:|::..||.|..:.|...|:.:...:..:..     ...|.:...||::.....|
  Rat    13 KPLDGG-WGWMVVLHFFLVNVFVMGMTKTFAIFFVVFQEEF-----EGTSEQIGWIGSIMSSLRF 71

  Fly   137 LFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAI 201
            ....:|..:.|..|.:.|:..|..|.:||.|:||:.| .|..|..|.|::.|||:|..|.....:
  Rat    72 SAGPLAAIICDIFGEKTTSILGTFLVSGGYLISSWAT-GIPFLCVTMGLLPGLGSAFLYQVAAVV 135

  Fly   202 LGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLH 266
            :..|||:.||..:....:|..: |.:|.|....|:..|...|.|.:...::..::..|.:.:|:|
  Rat   136 ITKYFKKRLGLSTAIARSGMGL-TFLLAPFTKLLIDLYDWTGALILFGAIALNLVPSSMLLRPVH 199

  Fly   267 ------------------PPPE-------PPKKK------------------------------- 275
                              ..||       |.:.|                               
  Rat   200 IQSDSNSDIKNKGSILSATGPELSHKTETPNRNKAQESLIKDSAVKKSGQPTTTLTVLENQIEEI 264

  Fly   276 ---PGRSRINLF---------------LRSIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQ 322
               |.|:|..|.               ...::::.:::...|.|:.....|:...||:|..|::.
  Rat   265 STRPHRNRPLLMSNDKTYKKKFVSWNCKEKLLDISLFRNPFFYIFTWSFLLSQLAYFIPTFHLVA 329

  Fly   323 FVKTTFPGEDV---NLPVMCIGITSGIGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTN 384
            ..||.  |.|:   :..|...|||..:.:||.|.|||...:.:....:..|:..|:..||.||..
  Rat   330 RAKTL--GIDIMDASYLVSVAGITETVSQLISGWIADQNWIKKYQYHKAYLILCGVTNLLAPLAT 392

  Fly   385 SYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDST 449
            ::.:|:::|:...:|.|.:::|:.|:..::...|...:.:|:....:.:.:..|||:||.|:|.|
  Rat   393 TFPLLMAYTIFFAIFAGGYLALILPVLVDLSKNSRVHRFLGYASFFAGMAVLSGPPIAGWIYDYT 457

  Fly   450 NSYTLPLILAGLPPLLGSSLLFLI 473
            .:|......:|...:|.|..||.:
  Rat   458 QTYVGSFYFSGTCYILSSVSLFFV 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 100/454 (22%)
MFS_1 124..439 CDD:284993 83/391 (21%)
Slc16a4NP_001013935.1 MFS_MCT5 20..486 CDD:340979 105/471 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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