DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and Slc16a13

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001005530.1 Gene:Slc16a13 / 287451 RGDID:1359138 Length:428 Species:Rattus norvegicus


Alignment Length:445 Identity:120/445 - (26%)
Similarity:205/445 - (46%) Gaps:43/445 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IHGKEPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAI 132
            :|..|||||| ..|:|::|||..:.::||.:.::||.........     .|.:::.:.|.::.|
  Rat     2 VHRTEPPDGG-WGWMVVLSAFFQSALVFGVLRSFGVFFVEFVAAF-----EEQAARVSWIASIGI 60

  Fly   133 GTTFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTP 197
            ......|.:...|:.|:|.|.....||:|:|.|:||:||.| ::..||.:.|::.|.|.||.:||
  Rat    61 AVQQFGSPIGSALSTKLGPRPVVMTGGILAALGMLLASFAT-SLTHLYLSIGLLSGSGWALTFTP 124

  Fly   198 TLAILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVY 262
            |||.|..||.:......|....|..:.:....|....||.:|...|.|.::|.:|..::.|..:.
  Rat   125 TLACLSRYFSQRRSLAMGLALTGVGISSFAFAPLFQWLLNNYAWRGALLLVSALSLHLVACGALL 189

  Fly   263 KPLHPPPEPPKKKPGRSRINLFLRSIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQFVKTT 327
            :||....:.....|.....:|....          .|:.:.:.:.|...|||:||||::..::..
  Rat   190 RPLSLTEDTAVGGPWAQITSLLCHG----------PFLRYTVALTLINTGYFIPYVHLVAHLQDL 244

  Fly   328 FPGEDVNLPVMCI----GITSGIGRLIFGVIAD-MPG-VNRMYLQQLSLVSIGLVTLLLPLTNSY 386
              |.| .||...:    .|:..:||:..|.:.| :|| |.|:.:...:|..:.|.  |.|:..:.
  Rat   245 --GWD-PLPAAFLLSVAAISDLVGRVASGWLGDAVPGPVARLLMLWTTLTGVSLA--LFPVAQAS 304

  Fly   387 VILVSFTLVMGLFDGCFISLLGPIAY----EICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFD 447
            ..||...:..|...|.    |.|:|:    |:.|.......:|.:..:.|:...:|.|::|.:.|
  Rat   305 TTLVVLAVAYGFTSGA----LTPVAFSVIPELVGTGRIYCGLGLVQMIESVGGLLGAPLSGYLRD 365

  Fly   448 STNSYTLPLILAGLPPLLGSSLLFLI----KCVKEEENGVSAPRAVVLANGDIEI 498
            .|.:||...::||...|.||.:|..:    .|:   ....|.|:.:|:...|.:|
  Rat   366 VTGNYTASFVVAGAFLLAGSGVLITLPHFFSCI---SLSTSRPQDLVIEAPDTKI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 101/387 (26%)
MFS_1 124..439 CDD:284993 84/324 (26%)
Slc16a13NP_001005530.1 MFS_MCT11_13 13..392 CDD:340981 107/403 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100246
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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