DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and Slc16a1

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_036848.1 Gene:Slc16a1 / 25027 RGDID:3690 Length:494 Species:Rattus norvegicus


Alignment Length:493 Identity:118/493 - (23%)
Similarity:201/493 - (40%) Gaps:61/493 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 GKEPPDGGARAWLVMVSAFLCNGIIFG-------FINTYGVIHSLLTDRLTKLGDPEASSKAALI 127
            |..||||| ..|.|:|.||:..|..:.       |.....:|.|..|            |:.:.|
  Rat    10 GYTPPDGG-WGWAVVVGAFISIGFSYAFPKSITVFFKEIEIIFSATT------------SEVSWI 61

  Fly   128 GALAIGTTFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAA 192
            .::.:...:....::..|.:|.|.|....|||.||..||:.:||| ..:..|||..|::.|||.|
  Rat    62 SSIMLAVMYAGGPISSILVNKYGSRPVMIAGGCLSGCGLIAASFC-NTVQELYFCIGVIGGLGLA 125

  Fly   193 LAYTPTLAILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIIL 257
            ....|.|.::|.||.:.....:|...|||.||...|.|......|.:|..|:..|:..:.....:
  Rat   126 FNLNPALTMIGKYFYKKRPLANGLAMAGSPVFLSTLAPLNQAFFGIFGWRGSFLILGGLLLNCCV 190

  Fly   258 CSFVYKPLHPPP---EPPKKK-------------------PGRSRINLF--LRSIINVEIWKRKR 298
            ...:.:|:.|..   |..|.|                   |...::::|  :...:::.::..:.
  Rat   191 AGSLMRPIGPQQGKVEKLKSKESLQEAGKSDANTDLIGGSPKGEKLSVFQTVNKFLDLSLFTHRG 255

  Fly   299 FVIWALCVPLALFGYFVPYVHMMQFVKTT-FPGEDVNLPVMCIGITSGIGRLIFGVIAD----MP 358
            |:::.....:..||.|.|.|.:..:.|:. |..|.....:..:.....:.|...|:.|:    .|
  Rat   256 FLLYLSGNVVMFFGLFTPLVFLSNYGKSKHFSSEKSAFLLSILAFVDMVARPSMGLAANTRWIRP 320

  Fly   359 GVNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQA 423
            .|  .|....|:|:.|:..||.||:.:||....:..|.|...|...|:|.....::.||...:.|
  Rat   321 RV--QYFFAASVVANGVCHLLAPLSTTYVGFCIYAGVFGFAFGWLSSVLFETLMDLVGPQRFSSA 383

  Fly   424 IGFLLGLSSIPLTVGPPVAGMIFDSTNSYT-------LPLILAGLPPLLGSSLLFLIKCVKEEEN 481
            :|.:..:...|:.:|||:.|.:.|....|.       :.||:|||...:|..:.:  :.|.:|:.
  Rat   384 VGLVTIVECCPVLLGPPLLGRLNDMYGDYKYTYWACGVILIIAGLYLFIGMGINY--RLVAKEQK 446

  Fly   482 GVSAPRAVVLANGDIEIAGNGHYRSAGTKSSAPLMGAT 519
            .....|.........::..........|:|.|||..::
  Rat   447 AEEKKRDGKEDETSTDVDEKPKKTMKETQSPAPLQNSS 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 100/420 (24%)
MFS_1 124..439 CDD:284993 81/343 (24%)
Slc16a1NP_036848.1 2A0113 1..462 CDD:273325 113/469 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 446..494 6/39 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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