DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and Slc16a4

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_666248.1 Gene:Slc16a4 / 229699 MGIID:2385183 Length:500 Species:Mus musculus


Alignment Length:479 Identity:110/479 - (22%)
Similarity:201/479 - (41%) Gaps:87/479 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 EPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTF 136
            :|.||| ..|:|::..||.|..:.|...|:.:...:..:..     ...|.:...||::.....|
Mouse    13 KPLDGG-WGWMVVLHFFLVNVFVMGMTKTFAIFFVVFQEEF-----EGTSEQIGWIGSIMSSLRF 71

  Fly   137 LFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAI 201
            ....:|..:.|.:|.:.|:..|..|.:||.::||:.| .|..|..|.|::.|||:|..|.....:
Mouse    72 SAGPLAAIICDVLGEKATSILGTFLVSGGYVISSWAT-GIPFLCVTMGLLPGLGSAFLYQVAAVV 135

  Fly   202 LGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLH 266
            :..|||:.||..:....:|..: |.:|.|....|:..|...|.|.:...:...::..|.:.:|:|
Mouse   136 ITKYFKKRLGLSTAIARSGMGL-TFLLAPFTKFLIDLYDWTGALILFGAIILNLVPSSMLLRPIH 199

  Fly   267 ------------------PPPE------------------------------------------- 270
                              ..||                                           
Mouse   200 SQSNNNSDIENKGSILSATEPEASYKTETSKCKETQEPFIKDSTMKKSEQPTTTLTVLGNQSEEF 264

  Fly   271 ---PPKKKP-----GRSRINLFL-----RSIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQ 322
               |.:.:|     |:|....|:     :.::::.:::...|.|:.....|:...||:|..|::.
Mouse   265 SNRPHRNRPLLMSNGKSHKKKFVSWNCKQKLLDISLFRNPFFYIFTWSFLLSQLAYFIPTFHLVA 329

  Fly   323 FVKTTFPGEDV---NLPVMCIGITSGIGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTN 384
            ..||.  |.||   :..|...|||..:.:||.|.|||...:.:....:..|:..|:..||.||..
Mouse   330 RAKTL--GIDVMDASYLVSVAGITETVSQLISGWIADQNWIKKYQYHKSYLILCGVTNLLAPLAT 392

  Fly   385 SYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDST 449
            ::.:|:::|::..:|.|.:::|:.|:..::...|...:.:|:....:.|.:..|||:||.|:|.|
Mouse   393 TFPLLMAYTILFAIFAGGYLALILPVLVDLSKNSRVHKFLGYASFFAGIAVLSGPPIAGWIYDYT 457

  Fly   450 NSYTLPLILAGLPPLLGSSLLFLI 473
            .:||.....:|...:|.|..||.:
Mouse   458 QTYTGSFYFSGTCYILSSVSLFFV 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 101/454 (22%)
MFS_1 124..439 CDD:284993 83/391 (21%)
Slc16a4NP_666248.1 2A0113 7..479 CDD:273325 108/475 (23%)
MFS 24..482 CDD:119392 104/467 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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