DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and Y59A8B.21

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001360616.1 Gene:Y59A8B.21 / 190398 WormBaseID:WBGene00013353 Length:506 Species:Caenorhabditis elegans


Alignment Length:505 Identity:95/505 - (18%)
Similarity:169/505 - (33%) Gaps:168/505 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 IIFGFIN---TYGVIHSL------LTDRLTKLGDPEASSKAALIGALAIGTTFLFSTMAGCLTDK 148
            |:||.::   |.|..|:.      :...:....||....: .::........|.|:.:.|.||..
 Worm    27 ILFGAVSIHLTIGTYHTFGNMLPYMASYMRNFTDPSVRIE-HMMWIPTFQGCFPFAMVIGGLTSS 90

  Fly   149 -IGLRLTTFAGGVLSAGGLLLSSFCTENIGALYF-TYGIMFGLGAALAYTPTLAILGHYFKRYLG 211
             ...|::.|.|..|....:.||::..::..||:| .||::||||:.:||...::...::....:|
 Worm    91 TFSPRVSAFIGCFLVTSSVALSAYAIQHSFALFFIVYGLLFGLGSGIAYVTAVSTAINWAPDKIG 155

  Fly   212 KVSGFVTAG----SSVFTVI--------------------------LPPCLDKLLGSYGLEGTLR 246
            .:||.|.||    ||:|..|                          :|....||...||:   ::
 Worm   156 VISGIVAAGFGLSSSIFAPIQTMIVNPLNLPATKDGYFLQPELLHRVPALFTKLAVIYGI---MQ 217

  Fly   247 IMSLVSAFIILCSFVYKPLH-------------------------------------PPPEPPKK 274
            .|:|    |::|...::..|                                     ...:.||.
 Worm   218 AMAL----IVVCDPPFRIRHSGLGSLSEYIFSSSSASANQRYSGVSYSRVRLDEVATSSTDEPKS 278

  Fly   275 KPGRSRINL--------FLRSII-----------NVEIWKRKRFVIWALCVPLALFGYFVPYVHM 320
            :...|.:..        :.|.:.           :.|:.|...|    .|:..:||.... |.:|
 Worm   279 RSTESILEEDDEDMDEDYERPVFDNDEDTTIQMTSSEMLKSPTF----YCLFASLFCCSF-YANM 338

  Fly   321 MQFVKTTFPG---EDVNLPVMCIGITS---GIGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLL 379
            ...:..|:..   ||.....|...|.|   .|.|:.:|.:.|.............|.|:.|:|  
 Worm   339 FYNLYKTYGESFIEDDMFMAMAFSIASVANAIARIGWGYLTDRTSFQIALSTATCLASVFLLT-- 401

  Fly   380 LPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAI------------------GF 426
            :|:|.....:.....::|.|              ||  .|||.|:                  |:
 Worm   402 MPMTRELGKMAFLFWLVGTF--------------IC--MGATHALFITATVKCFGNRHKANNYGY 450

  Fly   427 LLGLSSIPLTVGPPVAGMIFDSTNSYTLPLILAGLPPLLGSSLLFLIKCV 476
            |:        :....:|::..:.:.:.|..|        |.:.||:|..:
 Worm   451 LI--------LSTTTSGILLAAISQFYLKAI--------GYTYLFIITSI 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 91/486 (19%)
MFS_1 124..439 CDD:284993 80/426 (19%)
Y59A8B.21NP_001360616.1 MFS_OFA_like 23..496 CDD:340911 95/505 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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