DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and mct-1

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_503655.2 Gene:mct-1 / 189489 WormBaseID:WBGene00021227 Length:544 Species:Caenorhabditis elegans


Alignment Length:484 Identity:116/484 - (23%)
Similarity:195/484 - (40%) Gaps:111/484 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 PPDGGARAWLVMVSAFLCNGIIFGFINTYG-VIHSLLTDRLTKLGDPEASSKAALIGALAIGTTF 136
            ||||| ..|:|:.::||.|..:.|.|.|.| ::..:..|:.      .::|.|..:.::..|..:
 Worm    39 PPDGG-YGWVVVAASFLVNMAVDGVIYTCGKILVPIWADQF------GSTSVAGAVISILTGCYY 96

  Fly   137 LFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAI 201
            |...:|....:..|:|....||.:|:....|||.|.: .|..||..:|::.|:|....|.|::.|
 Worm    97 LAGPLASSFVNVFGIRSVAIAGSILATTAFLLSRFAS-TIWELYLLFGVLGGIGFGCMYLPSIVI 160

  Fly   202 LGHYFKRYLGKVSGFVTAGSS----VFTVILPPCLD---KLLGSYGLEGTLRIMSLVSAFII--- 256
            |..||.:.....:|....||.    ||:.|..|..|   |.:||:        |..::|..|   
 Worm   161 LSTYFAKKRSVATGIAVCGSGIGTMVFSTINGPVFDYFGKDVGSF--------MVYLAAIAISGS 217

  Fly   257 LCSFVYKPLH------------------PPPEPPKK-------------KPG------------- 277
            |.|.::.||.                  .|.||.::             :||             
 Worm   218 LFSLLFAPLKATEHQVKKVAKMVRNYEGKPEEPTQRLLEDVRNDLEELNRPGHNADTFYAGNAPV 282

  Fly   278 -RSRINLFLRS--------IINV-------EIWKRKRFVIW--ALC-------------VPLALF 311
             |||.|...|.        :::.       .:.|:.:|..:  :||             :.||:.
 Worm   283 SRSRSNTLDRKAAESAEAHVVHATEHHTVHHVVKKSKFTKFKESLCSVLDKDLLFSPSFMTLAVS 347

  Fly   312 GYF------VPYVHM---MQFVKTTFPGEDVNLPVMCIGITSGIGRLIFGVIADMPGVNRMYLQQ 367
            |.|      ||:|::   |:.....|...:::|||..||..:.:.|:..|::||.|.::.:.:..
 Worm   348 GTFTVLSFLVPFVYLALAMKQKNPDFTDAELSLPVTLIGAFNIMFRIGCGMVADHPKMSALQVSN 412

  Fly   368 LSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSS 432
            ::.:..|...|.:|........|.|.:.......||.:|...|..|:.|....:.|.|.|:....
 Worm   413 VATIIAGTSMLFVPFCTELWHYVVFCIPFSAGVACFAALRSVICVELIGVEKLSNAFGILMVFMG 477

  Fly   433 IPLTVGPPVAGMIFDSTNSYTLPLILAGL 461
            |...||.|:|..|.|.|.:|.:...:.|:
 Worm   478 IGAVVGGPIAAQIKDITGNYDISFYVMGI 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 110/472 (23%)
MFS_1 124..439 CDD:284993 92/408 (23%)
mct-1NP_503655.2 MFS_MCT_SLC16 45..519 CDD:340910 111/477 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4103
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H75089
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100246
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.720

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