DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and mct-5

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_495464.2 Gene:mct-5 / 187995 WormBaseID:WBGene00020168 Length:591 Species:Caenorhabditis elegans


Alignment Length:574 Identity:114/574 - (19%)
Similarity:199/574 - (34%) Gaps:172/574 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 PPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFL 137
            ||||| ..|:|::.:|..:....||:.::|::...|.....     ..::..:||.::..|.|..
 Worm    14 PPDGG-WGWVVVIGSFFIHVFADGFVYSFGILAEKLMIEFN-----SNNTMTSLIVSMLTGFTLG 72

  Fly   138 FSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAIL 202
            ...:|..:.:|.|.|:||..|..::..|.|||.|.|| |.....:.|::.|:|..|.|.|.:.|:
 Worm    73 AGPLASAVCNKYGCRITTIIGAGVAFVGCLLSCFATE-IWHFVISVGVIMGIGFGLVYCPAIVIV 136

  Fly   203 GHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPLH- 266
            ..||:......:|...||:.|..|:..|....::.:||......:...|.....:|...:.||. 
 Worm   137 TMYFESKRSLATGIAVAGAGVGAVVFGPINTFIISNYGWRYVFVLFLFVIILCAVCGATFVPLQF 201

  Fly   267 ------------------------------------PPPE-------------------PPKKKP 276
                                                .||:                   .|....
 Worm   202 ALVPDDDDDGEYNDVFEDEVKKIDYNKRFEEKVSLLSPPQVLERSMSQCCDIQKNNQHARPSSSV 266

  Fly   277 GRSRINLFLR-----------------------SIINVEIWKRK--------------------- 297
            |...:...||                       ||.||..::..                     
 Worm   267 GAVDLEPLLRPRCGTIGERNSGYLNRKDVFYTGSISNVAEFRANPDKYRSTGSLHTALNIHTHHT 331

  Fly   298 -----------------------------------------------------RFVIWALCVPLA 309
                                                                 .|:::|:...|.
 Worm   332 GTVGDDRESGHGCDQSLDGMNEKKETDFMDDIEGSNMFKTINNMFSFQLLLDPAFLLFAISNLLT 396

  Fly   310 LFGYFVPYVHMMQFVKTTFPGEDVNLPVMCI-GITSGIGRLIFGVIAD----MP-GV------NR 362
            ..|:..|...:...|.......:|:..::.: |..:.||||||||:||    :| |:      ||
 Worm   397 SVGFNSPLYFLPLHVTNILSDNNVSGNILSVYGTANTIGRLIFGVVADQKLPLPAGLGDDTARNR 461

  Fly   363 MYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFL 427
            :::..:||...|:||......:.|::|..:.::.|.....::.|...|..::.|....|.|.|.|
 Worm   462 LWMYNISLTICGIVTAFCYKFDGYILLDIYAVLFGFTIASYVCLTSVILVDLLGLDKLTNAFGLL 526

  Fly   428 LGLSSIPLTVGPPVAGMIFDSTNSYTLPLILAGLPPLLGSSLLFLIKCVKEEEN 481
            |....:...:||.|:|.:.|.|.:|||..:..|:..::...:||:|...|.:::
 Worm   527 LLWQGVGTVIGPLVSGYLADLTGNYTLSFVFCGINLMVSGLMLFVIPYFKRKDD 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 104/542 (19%)
MFS_1 124..439 CDD:284993 88/479 (18%)
mct-5NP_495464.2 MFS_MCT_SLC16 20..573 CDD:340910 107/558 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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