DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and slcf-1

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_509762.2 Gene:slcf-1 / 186633 WormBaseID:WBGene00010340 Length:450 Species:Caenorhabditis elegans


Alignment Length:522 Identity:106/522 - (20%)
Similarity:182/522 - (34%) Gaps:142/522 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 IEAPCCRDIHGKEPPDGGARA---------------WLVMVSAFL----------CNGIIFGFIN 99
            ||....:::....|| |..||               |:.:...::          .||.:...|.
 Worm     3 IERATRQNVRRGRPP-GTRRAVVFDDTPQPSEWRNIWVAICGFYILFAETGVRQVMNGFVEPVIK 66

  Fly   100 TYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLFSTMAGCLTDKIGLRLTTFAGGVLSAG 164
            ||         ..||    :.:..|.|:..:|  ::.:..........:.|.|::..||..|:.|
 Worm    67 TY---------NCTK----DQADTAVLVVPMA--SSLILGPFCSIFYQRSGARISIIAGSFLTGG 116

  Fly   165 GLLLSSFCTENIGALYF-TYGIMFGLGAALAYTPTLAILGHYFKRYLGKVSGFVTAGSSVFTVIL 228
            ..::..|| :||..|.. |:|:  |:|..|.....::|...|||:....|...::.|..:...||
 Worm   117 SFVVGPFC-KNIYLLMLATFGM--GIGCGLMRNSIISIQCEYFKKKRNTVMAAISIGPGLGIFIL 178

  Fly   229 PPCLDKLLGSYGLEGT----LRIMSLVSAFIILCSFVYKPLHPPPEPPKKKPGRSRINLFLRSII 289
            |..|..::..|...|.    |.:..:|||  |:..|:.||      |.::....|..:.|     
 Worm   179 PRTLKFIMVKYNSWGPAWWFLSLFYIVSA--IMGLFITKP------PSEQTSTFSFGSAF----- 230

  Fly   290 NVEIWKRKRF---VIWALCVPLALFGYFVPYVHMMQFVKTTFPGEDVNLPVMCIGITSGIGRLIF 351
              ::.|:..|   :|........:|.|....:.:|:....    ||..:.....|:||..|:.:.
 Worm   231 --KVCKKLEFDLHLIACFFASSVMFIYIANILILMESENI----EDKEILYGYQGLTSIAGKFVL 289

  Fly   352 GVIADMPGVNRMYLQQLSLVSIGLVTLLLPLTNSYVI------LVSFT--------------LVM 396
                       .::..|:.|..|::.:|     ||||      ..:|.              :.:
 Worm   290 -----------TFVMSLNKVHNGIIMIL-----SYVIAQLSLSAAAFCYKFWQFRLQNAFAGIGI 338

  Fly   397 GLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIF-----DSTNSYTLPL 456
            ||:..|    |.|....:.|||....|:||...::.:.:..|..::|...     |...|.....
 Worm   339 GLYQAC----LAPFLVALVGPSQLAYALGFTNLINGVSIISGVWISGFASKGTTGDHARSAFFVS 399

  Fly   457 ILAGLPPLLGSSLLFLIKCVKEEENGVSAPRAVVLANGDIEIAGNGHYRSAGTKS---SAPLMGA 518
            |..||..::.|                       :|...:.:|...|.|....|.   |:.|...
 Worm   400 IWLGLAAIVMS-----------------------IATSSVLMAREKHKRKPSMKQMKHSSELNAL 441

  Fly   519 TN 520
            ||
 Worm   442 TN 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 87/420 (21%)
MFS_1 124..439 CDD:284993 74/342 (22%)
slcf-1NP_509762.2 MFS 44..410 CDD:119392 88/422 (21%)
MFS_1 79..376 CDD:284993 73/340 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG50069
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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