DRSC/TRiP Functional Genomics Resources

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Protein Alignment kar and mct-4

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001041267.1 Gene:mct-4 / 180766 WormBaseID:WBGene00003986 Length:777 Species:Caenorhabditis elegans


Alignment Length:655 Identity:119/655 - (18%)
Similarity:210/655 - (32%) Gaps:257/655 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 EPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTF 136
            :.|||| ..|:::.:||:.|.::.|....:........:|.     .|:......||:|.|||..
 Worm    68 QAPDGG-YGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERY-----QESDGLTVFIGSLIIGTYL 126

  Fly   137 LFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAI 201
            |...:...|.:|...|....|||::|....:::. .:.||......||:|.|||..:.|.|.:.:
 Worm   127 LVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAP-ASPNIYVFMLIYGVMGGLGFGMIYLPAIVV 190

  Fly   202 LGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKPL- 265
            :|.||.......:|...|||.|.|.::|......:.:.|.:.|:.:::::....:...::|:|| 
 Worm   191 VGFYFDSKRAMATGISVAGSGVGTFLVPLICQVCIANLGWQKTIWVLAVMIFSCVFYGYLYRPLP 255

  Fly   266 ---------------------------------HP------------------------------ 267
                                             ||                              
 Worm   256 MVDLNEIRDQEMEPLRQALSKVEDDEDEAVESPHPNRSTSAASGAIEDEAVSQNPEVQRLRSILT 320

  Fly   268 ----PPEPPK------------------------------------------------------- 273
                ..|.||                                                       
 Worm   321 EGDEGSETPKSDAHKVRSHTATRSRKHTMTSNSGSQHDLKLSRGNLSSDNRLSRVSARDFNQSLS 385

  Fly   274 --------------------------------------------KKPGR---------------- 278
                                                        |:.|.                
 Worm   386 KLSKSGGASNLSIAMSGVDPKEFQRPMNRQDIFYGGSIQNLKEFKEEGTMAGYRASTLSIPRSVV 450

  Fly   279 ----SRINL--------------------------------------FLRSIINVEIWKRKRFVI 301
                |::||                                      .|..:|::.:.|.|..:|
 Worm   451 GQAVSQLNLSRTGSRLGGPGIAEDEEEMIEPFVDDGCCKVLPLPMRNALSEMIDLNLLKNKTMMI 515

  Fly   302 WALCVP--LALFGYFVPYVHMMQFVKTTFPGE--DVNLPVMCI---GITSGIGRLIFGVIADMPG 359
              ||:.  |.:.|:::|    :.|:|......  |::|.:..:   |:.:.|||:.||.:.|...
 Worm   516 --LCISNLLGMMGFYIP----IMFLKDLSESMKLDMSLAMFLVPIFGVFNTIGRVFFGWLTDQKI 574

  Fly   360 VNRMYLQQLSLVSIGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAI 424
            ::.:.:..|||:..||:||..||..|......:.:|.|.....:|.|...:..::.|....|.:.
 Worm   575 LSALTINNLSLIVSGLLTLACPLLTSIAGQYFYAIVFGFIISAYICLTSIVLADLMGLENLTNSF 639

  Fly   425 GFLLGLSSIPLTVGPPVAGMIFDSTNSYT-------LPLILAGLPPLLGSSLLFLIKCVKEEENG 482
            |.|:....|...||||.||:::|.|.||.       |.|::||   |:.:::.|:.|  |:.:..
 Worm   640 GLLVVARGIASLVGPPFAGIVYDITGSYDTAFYFGGLVLLVAG---LISATIPFVTK--KDADTA 699

  Fly   483 VSAPR 487
            ...|:
 Worm   700 DGMPQ 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 108/616 (18%)
MFS_1 124..439 CDD:284993 90/546 (16%)
mct-4NP_001041267.1 MFS_MCT_SLC16 75..>252 CDD:340910 43/182 (24%)
MFS_MCT_SLC16 <507..689 CDD:340910 53/190 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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