DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kar and slc16a6

DIOPT Version :9

Sequence 1:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_031750265.1 Gene:slc16a6 / 100494933 XenbaseID:XB-GENE-6257787 Length:522 Species:Xenopus tropicalis


Alignment Length:539 Identity:112/539 - (20%)
Similarity:204/539 - (37%) Gaps:111/539 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLF 138
            |||| ..|.|..:.|......:|.|.::||..:.|....     .|::|:.:.|.::.:......
 Frog    17 PDGG-WGWAVAGAFFFVEVFTYGVIKSFGVFFNELVGYF-----DESNSRISWIISICVFVMTFT 75

  Fly   139 STMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAILG 203
            :.::..|:::.|.|.....||:|.:.|::.:|| ..::|.:|...|::.|||..|.:.||:.||.
 Frog    76 APLSTVLSNRFGHRPVVMVGGLLISTGMMAASF-ARSVGEMYVAIGLISGLGYCLTFLPTVTILS 139

  Fly   204 HYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKP--LH 266
            .||:|....|:...:.|.........|.:..|....|....|.::..:...|::|..:.:|  :.
 Frog   140 QYFERRRSLVTAVASTGECFAVFAFAPAITALNDLIGWRCCLLMVGALQLNIVVCGSLLRPITIK 204

  Fly   267 PP----------------------------------------------------PEPPKKK---- 275
            ||                                                    ||||:::    
 Frog   205 PPDVAKSPAKGEALESAYMLENEQTLTSIDSIDSGVEVSTSPKNLPTGLKPARSPEPPRERKETA 269

  Fly   276 ----PGRSRINLFLRSIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQFVKTTFPGEDVNL- 335
                |         ..:::..:.:...|:.:||....|..|:|.|.::::....:.  |.|..| 
 Frog   270 ERPEP---------EPLLDFSVLRNPSFICYALFGLFATLGFFAPSLYIIPLSLSL--GIDRELS 323

  Fly   336 PVM--CIGITSGIGRLIFGVIADMPGVNRMYLQQLSLVSIGLVTLL-LPLTNSY----VILVSFT 393
            |.|  .:.|:...||:..|.|.:...|.::|: :|:.|::..|.|| .|...::    ...|.|.
 Frog   324 PYMLSAMAISEVFGRIGAGWILNKKPVRKIYI-ELAFVALLCVALLAFPFAWNFGGLMACSVFFG 387

  Fly   394 LVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTNSYTLPLIL 458
            .::|...|..|.|:.  ..:|.|.......:|..:.:.|:....|||:.|::.|.|.:|......
 Frog   388 GMLGTVTGTHIPLVA--EDDIVGIDKMASGVGVYVFIQSVAGLAGPPLGGVLVDWTQNYGSAFYS 450

  Fly   459 AGLPPLLGSSLLFLIKCVKEEENGVSAPRAVVLANGDIEIAGNGHYRSAGTKSSAPL------MG 517
            ......||:..|.|::..| ...|...|.|             ||:.........|:      :.
 Frog   451 CAAGMALGALFLALVRPCK-RGLGKEKPAA-------------GHHPLCQDAKELPVDFLEMDLA 501

  Fly   518 ATNGINGSAPASPTIQSNG 536
            ...|::.|..:.....|||
 Frog   502 RAEGLSKSCQSLNEAPSNG 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
karNP_001189213.1 MFS 81..459 CDD:119392 92/447 (21%)
MFS_1 124..439 CDD:284993 75/384 (20%)
slc16a6XP_031750265.1 MFS_MCT7 22..466 CDD:340980 96/463 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.