Protein Alignment Ldh and PMDH2

DIOPT Version :10

• Sequence 1: NP_476581.1
• Gene: Ldh / 45880
• FlyBaseID: FBgn0001258
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_001119199.1
• Gene: PMDH2 / 830825
• AraportID: AT5G09660
• Length: 363
• Species: Arabidopsis thaliana
• Alignment Length: 279
• Identity: 65/279 - (23%)
• Similarity: 117/279 - (41%)
• Gaps: 55/279 - (19%)

  Fly    20 GHKVTIVGIGQVGMASAFSILAQNVSKEVCLIDVCADKLQGELMDLQHGSNFLKNPQITASTDFA 84
            |.||.|:|... |:..:.|:|.:                ...|:.|.|..:.:..|.:||.....
plant    42 GFKVAILGAAG-GIGQSLSLLMK----------------MNPLVSLLHLYDVVNAPGVTADVSHM 89

  Fly    85 -----------------ASANSRLCIVTAGVRQKEGESRLSLVQRNTDILKNIIPKLVEYSPDTI 132
                             |.....|.|:.||:.:|.|.:|..|.:.|..|:|.:...:.:..|:.|
plant    90 DTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAI 154

  Fly   133 LLMVSNPVDIMTYVA---WKLSGL--PKNRVIGSGTNLDSSRFRFLMSQRLGVAPTSCHGWIIGE 192
            :.::||||:....:|   :|.:|.  || :::|. |.||.:|....:::.||:.|......::|.
plant   155 VNLISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TTLDVARANTFVAEVLGLDPREVDVPVVGG 217

  Fly   193 HGDSSVPVWSGVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVIKLK---GYTSWAIGL 254
            |        :||.|..: |.::.|  .:...|::...|..::.:...||::.|   |..:.::..
plant   218 H--------AGVTILPL-LSQVKP--PSSFTPQEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAY 271

  Fly   255 STASLASAILRNTSSVAAV 273
            :.|..|.|.||.....|.|
plant   272 AAAKFADACLRGLRGDANV 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ldh	NP_476581.1	LDH_1	18..329	CDD:133429	65/279 (23%)
PMDH2	NP_001119199.1	PLN00106	31..300	CDD:215058	65/279 (23%)