DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldh and CG10748

DIOPT Version :9

Sequence 1:NP_001261474.1 Gene:Ldh / 45880 FlyBaseID:FBgn0001258 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_648615.1 Gene:CG10748 / 39469 FlyBaseID:FBgn0036327 Length:349 Species:Drosophila melanogaster


Alignment Length:330 Identity:73/330 - (22%)
Similarity:140/330 - (42%) Gaps:41/330 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KVTIVGIGQVGMASAFSILAQNVS--KEVCLIDVCADKLQGELMDLQHGSNFLKNPQITASTDF- 83
            ||.:||.|. |:....|:|.:...  .|:.|.|:  .:::|...||.|.|...|....|...:. 
  Fly    24 KVAVVGAGG-GIGQPLSLLLRRCPGIDELALHDL--SEMKGIATDLSHISQTGKVIGFTGEKELE 85

  Fly    84 AASANSRLCIVTAGVRQKEGESRLSLVQRNTDILKNIIPKLVEYSPDTILLMVSNPVDIMTYVAW 148
            :|.:.:.:.:|.||:.:..|..|..|:..|.::...:...:...||...|..::|||:::...|.
  Fly    86 SAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFITNPVNMIVPAAA 150

  Fly   149 KL---SGLPKNRVIGSGTNLDSSRFRFLMSQRLGVAPTSCHGWIIGEHGDSSVPVWSGVNIAGVR 210
            ::   .|...:|.:...|.||..|.:..:...:.::|...:..:||.|        :|:.|..: 
  Fly   151 EVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNISPDDVNIPVIGGH--------AGITILPL- 206

  Fly   211 LRELNPILGTGEDPEKWNELHKQVVDSAYEVIKLKGYTSWAIGLSTASLASAILRNTSSVAAVST 275
            :.:..||...  |.::...|..::.::..||:..|.    ..|.:|.|:|.|   ..:.|.::..
  Fly   207 ISQCQPIYRC--DLQEIQNLTHRIQEAGTEVVNAKA----GKGSATLSMAYA---GATFVNSLLR 262

  Fly   276 SVLGEHGI-----------DKDVFLSLPCVLNANGVTSVVK-QILTPTEVEQLQKSANIM-SDVQ 327
            .:.|:.|:           |...|.| |..|..:|:...:. ..::..|.|.|:|...|: .:..
  Fly   263 GIAGQDGLIECAFVASKLTDAPFFAS-PLELGKDGIKRYIPLPQMSDYEKEALEKLLPILRQNAD 326

  Fly   328 AGLKF 332
            .|:.|
  Fly   327 EGVNF 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LdhNP_001261474.1 LDH_1 18..329 CDD:133429 71/325 (22%)
CG10748NP_648615.1 MDH_euk_gproteo 36..333 CDD:130833 67/317 (21%)
MDH_glyoxysomal_mitochondrial 36..332 CDD:133422 67/317 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452291
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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