Protein Alignment Ldh and Ldha

DIOPT Version :9

• Sequence 1: NP_001261474.1
• Gene: Ldh / 45880
• FlyBaseID: FBgn0001258
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: XP_006229294.1
• Gene: Ldha / 24533
• RGDID: 2996
• Length: 361
• Species: Rattus norvegicus
• Alignment Length: 332
• Identity: 205/332 - (61%)
• Similarity: 263/332 - (79%)
• Gaps: 0/332 - (0%)

  Fly     1 MAAIKDSLLAQVAEVLPSSGHKVTIVGIGQVGMASAFSILAQNVSKEVCLIDVCADKLQGELMDL 65
            |||:||.|:..:.:......:|:|:||:|.||||.|.|||.::::.|:.|:||..|||:||:|||
  Rat    30 MAALKDQLIVNLLKEEQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDL 94

  Fly    66 QHGSNFLKNPQITASTDFAASANSRLCIVTAGVRQKEGESRLSLVQRNTDILKNIIPKLVEYSPD 130
            ||||.|||.|:|.:|.|::.:|||:|.|:|||.||:||||||:|||||.:|.|.|||.:|:|||.
  Rat    95 QHGSLFLKTPKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQ 159

  Fly   131 TILLMVSNPVDIMTYVAWKLSGLPKNRVIGSGTNLDSSRFRFLMSQRLGVAPTSCHGWIIGEHGD 195
            ..||:|||||||:||||||:||.|||||||||.||||:|||:||.:||||.|.|||||::|||||
  Rat   160 CKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGD 224

  Fly   196 SSVPVWSGVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVIKLKGYTSWAIGLSTASLA 260
            ||||||||||:|||.|:.|||.|||..|.|:|.::|||||||||||||||||||||||||.|.||
  Rat   225 SSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLA 289

  Fly   261 SAILRNTSSVAAVSTSVLGEHGIDKDVFLSLPCVLNANGVTSVVKQILTPTEVEQLQKSANIMSD 325
            .:|::|...|..:||.:.|.:||.:|||||:||:|..||::.|||..|||.|..:|:|||:.:..
  Rat   290 ESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWG 354

  Fly   326 VQAGLKF 332
            :|..|:|
  Rat   355 IQKELQF 361

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ldh	NP_001261474.1	LDH_1	18..329	CDD:133429	197/310 (64%)
Ldha	XP_006229294.1	LDH_1	48..358	CDD:133429	197/309 (64%)
		L-LDH-NAD	54..353	CDD:273796	194/298 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	223	1.000	Domainoid score	I2481
eggNOG	1	0.900	-	-		E1_COG0039
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	426	1.000	Inparanoid score	I1690
OMA	1	1.010	-	-		QHG59943
OrthoDB	1	1.010	-	-		D1204514at2759
OrthoFinder	1	1.000	-	-		FOG0001004
OrthoInspector	1	1.000	-	-		otm44586
orthoMCL	1	0.900	-	-		OOG6_100601
Panther	1	1.100	-	-	O	PTHR43128
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X661
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.840