DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldh and LDHAL6A

DIOPT Version :10

Sequence 1:NP_476581.1 Gene:Ldh / 45880 FlyBaseID:FBgn0001258 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_011518224.2 Gene:LDHAL6A / 160287 HGNCID:28335 Length:399 Species:Homo sapiens


Alignment Length:349 Identity:189/349 - (54%)
Similarity:242/349 - (69%) Gaps:18/349 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAIKDSLLAQVAEVLPSSGHKVTIVGIGQVGMASAFSILAQNVSKEVCLIDVCADKLQGELMDL 65
            ||.||..|:...||......:|::|||.|.||:|.|.|||.:.:|.|:.|:||...||:||.|||
Human    50 MATIKSELIKNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDL 114

  Fly    66 QHGSNFLKNPQITASTDFAASANSRLCIVTAGVRQKEGESRLSLVQRNTDILKNIIPKLVEYSPD 130
            ||||.|:|.|.|.:|.|:..:|||.|.|:|||.|||:||:||.|||||..|.|.:||.:.:|||.
Human   115 QHGSPFMKMPNIVSSKDYLVTANSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYSPH 179

  Fly   131 TILLMVSNP------------------VDIMTYVAWKLSGLPKNRVIGSGTNLDSSRFRFLMSQR 177
            ..||:|:||                  |||:|||||||||.|||||||||.||||:|||:.:.||
Human   180 CKLLIVTNPALCMRKLKDISTILLSISVDILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFIGQR 244

  Fly   178 LGVAPTSCHGWIIGEHGDSSVPVWSGVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVI 242
            ||:...||||.|:|||||||||||||||||||.|::|||.:||.:|||:|..:||:|:.|.||::
Human   245 LGIHSESCHGLILGEHGDSSVPVWSGVNIAGVPLKDLNPDIGTDKDPEQWENVHKKVISSGYEMV 309

  Fly   243 KLKGYTSWAIGLSTASLASAILRNTSSVAAVSTSVLGEHGIDKDVFLSLPCVLNANGVTSVVKQI 307
            |:||||||.|.||.|.|..:||:|...|..|||...|.:||::|:|||:||:|..||:|.::|..
Human   310 KMKGYTSWGISLSVADLTESILKNLRRVHPVSTLSKGLYGINEDIFLSVPCILGENGITDLIKVK 374

  Fly   308 LTPTEVEQLQKSANIMSDVQAGLK 331
            ||..|...|||||..:.::|..||
Human   375 LTLEEEACLQKSAETLWEIQKELK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LdhNP_476581.1 LDH_1 18..329 CDD:133429 180/328 (55%)
LDHAL6AXP_011518224.2 LDH_1 68..396 CDD:133429 180/327 (55%)

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