DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldh and Mdh2

DIOPT Version :10

Sequence 1:NP_476581.1 Gene:Ldh / 45880 FlyBaseID:FBgn0001258 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_321163.4 Gene:Mdh2 / 1281223 VectorBaseID:AGAMI1_003251 Length:337 Species:Anopheles gambiae


Alignment Length:345 Identity:89/345 - (25%)
Similarity:143/345 - (41%) Gaps:71/345 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KVTIVGIGQVGMASAFSILAQN--VSKEVCLIDVCADKLQGELMDLQH--------GSNFLKNPQ 76
            ||.:.| ...|:....|:|.:|  :..|:.|.|:.  ...|...||.|        |.|..:|.:
Mosquito    26 KVAVCG-ASGGIGQPLSLLLKNSPLVTELSLYDIV--HTPGVAADLSHIETQSKVTGYNGPENLE 87

  Fly    77 ITASTDFAASANSRLCIVTAGVRQKEGESRLSLVQRNTDILKNIIPKLVEYSPDTILLMVSNPVD 141
                   .|...:.:.|:.|||.:|.|.:|..|...|..|::::.....:..|..::.::||||:
Mosquito    88 -------KALKGADIVIIPAGVPRKPGMTRDDLFNTNASIVRDLAAGCAKACPKALIGIISNPVN 145

  Fly   142 IMTYVA----WKLSGLPKNRVIGSGTNLDSSRFRFLMSQRLGVAPTSCHGWIIGEHGDSSVPVWS 202
            ....:|    .|...|...||.|..| ||..|....:.:..||.|......:||.|        |
Mosquito   146 STVPIACDTLQKAGVLDPRRVFGVST-LDIVRANTFVGEAAGVDPQKMSVPVIGGH--------S 201

  Fly   203 GVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVIKLK---GYTSWAIGLSTASLASAIL 264
            ||.|..| |.:..|  |.....:|...|.:::.::..||:|.|   |..:.::..:.|..|.|:.
Mosquito   202 GVTIIPV-LSQTKP--GVNFPQDKITALTERIQEAGTEVVKAKAGAGSATLSMAYAGARFALALA 263

  Fly   265 R------NTSSVAAVSTSV-----------LGEHGIDKDVFLSLPCVLNANGVTSVVKQILTPTE 312
            |      |....|.|.:.|           ||::|::|:  |.|| .|||      .:|.|....
Mosquito   264 RAMNGEQNVIECAYVRSDVTESKYFATPLLLGKNGLEKN--LGLP-KLNA------YEQELLKKA 319

  Fly   313 VEQLQKSANIMSDVQAGLKF 332
            :.:|:|      ::|.|.:|
Mosquito   320 IPELKK------NIQKGEEF 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LdhNP_476581.1 LDH_1 18..329 CDD:133429 87/340 (26%)
Mdh2XP_321163.4 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 89/345 (26%)

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