DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and Lrp1b

DIOPT Version :9

Sequence 1:NP_001261577.1 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:XP_006498522.1 Gene:Lrp1b / 94217 MGIID:2151136 Length:4668 Species:Mus musculus


Alignment Length:314 Identity:88/314 - (28%)
Similarity:117/314 - (37%) Gaps:91/314 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1354 LGLEAVSLGLACSSDRQCQLADPHTVCNRRGVCDCAAGEEGSQCSAE-RTGCSPGTFQCRSSGVC 1417
            ||:::... :.|:|...|.|  |..:|:  |..||....:..:|..: :..|....|.| .||.|
Mouse  2667 LGVKSTGF-IRCNSTSLCVL--PSWICD--GSNDCGDYSDELKCPVQNKHKCEENYFGC-PSGRC 2725

  Fly  1418 ISWFFVCDGRADCNDASDE-ECTHNARLNQ----------------------------------- 1446
            |...:||||:.||.|..|| .|..:...||                                   
Mouse  2726 ILNTWVCDGQKDCEDGLDELHCDSSCSWNQFACSVKKCISKHWICDGEDDCGDSLDESDSICGAV 2790

  Fly  1447 TCPTESFRCQRSGRCISRAALCDGRRQCPHGEDELGCDGSVKGGNACPEHTFRCGSGECLPEYEY 1511
            ||..:.|.||.|..|:.:..||||.|.||.|.|||...|... .|.|.|:.|.|.:..|:|:...
Mouse  2791 TCAADMFSCQGSHACVPQHWLCDGERDCPDGSDELSSAGCAP-NNTCDENAFMCHNKVCIPKQFV 2854

  Fly  1512 CNAIVSCKDGSDE----PPHLCG--------SRALPNLFMRLIEAGGLLGGGRREADAYCP---- 1560
            |:....|.|||||    ....||        .|.|.|...:.            :.|..||    
Mouse  2855 CDHDDDCGDGSDEFLQCGYRQCGPEEFRCADGRCLVNTLWQC------------DGDFDCPDSSD 2907

  Fly  1561 ------------HRCS-------NGLCRSTAIVCSGRDGCGDGTDEQTCSVCRC 1595
                        |.|:       ||.|..:..:|..||.||||:||..|.:..|
Mouse  2908 EAPINPRCRSAEHSCNSSFFMCKNGRCIPSDGLCDIRDDCGDGSDETNCHINEC 2961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_001261577.1 EB 75..131 CDD:279949
LDLa 1404..1437 CDD:238060 16/33 (48%)
LDLa 1448..1483 CDD:238060 17/34 (50%)
LDLa 1493..1524 CDD:238060 11/30 (37%)
LDLa 1561..1590 CDD:238060 14/35 (40%)
Lrp1bXP_006498522.1 LDLa 1167..1202 CDD:238060
FXa_inhibition 1207..1243 CDD:373209
LY 1311..1352 CDD:214531
LY 1358..1398 CDD:214531
LY 1402..1445 CDD:214531
LY <1457..1489 CDD:214531
LY 1635..1670 CDD:214531
LY 1672..1714 CDD:214531
LY 1716..1755 CDD:214531
LY <1766..1797 CDD:214531
FXa_inhibition 1869..1905 CDD:373209
NHL 1944..2169 CDD:302697
NHL repeat 1944..1983 CDD:271320
LY 1978..2018 CDD:214531
NHL repeat 1988..2025 CDD:271320
NHL repeat 2029..2070 CDD:271320
Ldl_recept_b 2039..2079 CDD:278487
LY 2064..2106 CDD:214531
NHL repeat 2073..2111 CDD:271320
NHL repeat 2120..2159 CDD:271320
FXa_inhibition 2178..2213 CDD:373209
Ldl_recept_b 2361..2402 CDD:278487
LY 2386..2428 CDD:214531
LDLa 2545..2574 CDD:238060
LDLa 2583..2617 CDD:238060
LDLa 2622..2656 CDD:238060
LDLa 2676..2705 CDD:238060 9/32 (28%)
LDLa 2713..2747 CDD:238060 16/34 (47%)
LDLa 2751..2784 CDD:238060 2/32 (6%)
LDLa 2791..2824 CDD:197566 15/32 (47%)
LDLa 2875..2908 CDD:197566 8/44 (18%)
LDLa 2922..2956 CDD:238060 13/33 (39%)
LDLa 63..95 CDD:238060
LDLa 107..140 CDD:197566
FXa_inhibition 194..224 CDD:373209
LY 314..346 CDD:214531
LY 350..392 CDD:214531
LY 394..435 CDD:214531
FXa_inhibition 514..547 CDD:373209
LY 580..621 CDD:214531
LY 622..661 CDD:214531
LY 668..717 CDD:214531
LY 718..760 CDD:214531
FXa_inhibition 829..864 CDD:373209
LDLa 917..950 CDD:238060
LDLa 957..989 CDD:197566
LDLa 1000..1033 CDD:238060
LDLa 1037..1070 CDD:238060
LDLa 1084..1119 CDD:238060
Ldl_recept_a 1131..1162 CDD:365841
cEGF 2979..3002 CDD:372248
EGF_CA 2999..3033 CDD:214542
LY 3066..3110 CDD:214531
LY 3111..3149 CDD:214531
LY 3154..3195 CDD:214531
LY 3198..3237 CDD:214531
FXa_inhibition 3308..3344 CDD:373209
LDLa 3348..3379 CDD:197566
LDLa 3388..3422 CDD:238060
LDLa 3427..3462 CDD:238060
LDLa 3467..3502 CDD:238060
LDLa 3507..3541 CDD:238060
LDLa 3546..3580 CDD:238060
LDLa 3584..3618 CDD:238060
LDLa 3625..3659 CDD:238060
LDLa 3663..3698 CDD:238060
LDLa 3705..3737 CDD:238060
LDLa 3746..3782 CDD:238060
LDLa 3793..3827 CDD:238060
EGF_CA 3875..3909 CDD:214542
NHL 3972..4204 CDD:302697
NHL repeat 4002..4039 CDD:271320
NHL repeat 4060..4098 CDD:271320
Ldl_recept_b 4070..4110 CDD:393440
LY 4094..4133 CDD:214531
NHL repeat 4148..4186 CDD:271320
EGF_CA 4281..4315 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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