DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and LRP8

DIOPT Version :10

Sequence 1:NP_524849.2 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:NP_004622.2 Gene:LRP8 / 7804 HGNCID:6700 Length:963 Species:Homo sapiens


Alignment Length:285 Identity:81/285 - (28%)
Similarity:101/285 - (35%) Gaps:86/285 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1365 CSSDR-QCQLADPHTVCNRRGV-----C----DCAAGEEGSQCSAERTGCSPGTFQCRSSGVCIS 1419
            |..|: ||:        |.|.:     |    ||....:...|  .:..|:...|.| .:|.||.
Human    47 CEKDQFQCR--------NERCIPSVWRCDEDDDCLDHSDEDDC--PKKTCADSDFTC-DNGHCIH 100

  Fly  1420 WFFVCDGRADCNDASDEE---CTHNARLNQTCPTESFRC-QRSGRCISRAALCDGRRQCPHGEDE 1480
            ..:.|||..:|.|.|||.   ||     .|.||.|...| ..|.:|:..:..|||.:.|..|.||
Human   101 ERWKCDGEEECPDGSDESEATCT-----KQVCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADE 160

  Fly  1481 LGC------------------------------DGSVKGG---NACPEHTFRC---GSGECLPEY 1509
            .||                              |||.:.|   .||....|||   |.|.|:||.
Human   161 AGCATLCAPHEFQCGNRSCLAAVFVCDGDDDCGDGSDERGCADPACGPREFRCGGDGGGACIPER 225

  Fly  1510 EYCNAIVSCKDGSDEPPHLCGSRALPNLFMRLIEAGGLLGGGRREADAYC----PHRCSNGLCRS 1570
            ..|:....|:|.|||...|||..                |.|...|.|.|    ...|.:|.|..
Human   226 WVCDRQFDCEDRSDEAAELCGRP----------------GPGATSAPAACATASQFACRSGECVH 274

  Fly  1571 TAIVCSGRDGCGDGTDEQTCSVCRC 1595
            ....|.|...|.|.:||..|.:..|
Human   275 LGWRCDGDRDCKDKSDEADCPLGTC 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_524849.2 EB 75..131 CDD:460294
rne <795..981 CDD:236766
LDLa 1404..1437 CDD:238060 13/32 (41%)
LDLa 1448..1483 CDD:238060 13/35 (37%)
LDLa 1493..1524 CDD:238060 13/33 (39%)
LRP8NP_004622.2 LDLa 47..81 CDD:238060 9/41 (22%)
LDLa 85..117 CDD:197566 12/32 (38%)
LDLa 127..163 CDD:238060 13/35 (37%)
LDLa 206..240 CDD:197566 13/33 (39%)
Ldl_recept_a 262..294 CDD:395011 9/31 (29%)
Ldl_recept_a 298..333 CDD:395011 1/2 (50%)
FXa_inhibition 340..374 CDD:464251
EGF_CA 376..406 CDD:214542
LY 445..480 CDD:214531
LDL-receptor class B 1 462..508
LY 489..531 CDD:214531
LDL-receptor class B 2 509..551
LDL-receptor class B 3 552..595
Ldl_recept_b 552..592 CDD:459654
LY 576..618 CDD:214531
LDL-receptor class B 4 596..639
Ldl_recept_b 639..679 CDD:459654
LDL-receptor class B 5 640..681
FXa_inhibition 697..734 CDD:464251
Clustered O-linked oligosaccharides 740..798
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..815
Blue background indicates that the domain is not in the aligned region.

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