DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and lrp13

DIOPT Version :9

Sequence 1:NP_001261577.1 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:XP_021327248.1 Gene:lrp13 / 562438 ZFINID:ZDB-GENE-130729-1 Length:1354 Species:Danio rerio


Alignment Length:543 Identity:125/543 - (23%)
Similarity:166/543 - (30%) Gaps:196/543 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1120 IPELFAEAAKDEEDVPALPESDESKTEQPSALEVEQHIASEAEQTPVEDEHQYDEEEHQQDQEEH 1184
            :||.|.    .:.||..:..|||:..|.|.                 :|:   |::|...|::|.
Zfish   128 VPESFV----CDGDVDCVDGSDEANCENPD-----------------DDD---DDDEDLLDEKEE 168

  Fly  1185 QQDEDEPLKEVETESLPEEATTEKFQEPEPEEVNTPLPEELPFDLTDHSDVNRFNELQSESLILE 1249
            ...|.|..:.|.....|               :...:..:|..|.||...:|..           
Zfish   169 MTGEHEVSQNVPATKGP---------------LRCSIASKLCRDGTDCVMLNHV----------- 207

  Fly  1250 STTNIDGLQELDNNHIEEEEPAAHAIPHEEATPNPADIVEITTQTMLG--LASRVTLMEPAAPVV 1312
                .||  |||.....:||..            |........|...|  ...|..|.:      
Zfish   208 ----CDG--ELDCKDGSDEEDC------------PVQCESGQFQCAHGKKCIDRRQLCD------ 248

  Fly  1313 TTLMPLMTADEPTPEPVSPAAIP-----SASLAAIKPGTELRKRVDLGLEAVSLGLACSSDRQCQ 1372
                                .:|     |..|...||..:...|.|.....|.....|..|.   
Zfish   249 --------------------GVPQCQDRSDELNCFKPDDDCAHRCDENTRCVPESFVCDGDP--- 290

  Fly  1373 LADPHTVCNRRGVCDCAAGEEGSQCSAERTGCSPGTFQCRSSGVCISWFFVCDGRADCNDASDEE 1437
                          ||..|.:.:.|..|  .||...:|| |||.|:|....|||.:||.|.||||
Zfish   291 --------------DCVDGSDEANCGEE--SCSSAEWQC-SSGQCVSLSMRCDGHSDCRDHSDEE 338

  Fly  1438 -------CTHNARLNQT-------------------------------CPTESFRCQRSGRCISR 1464
                   |:.|.|..::                               |....|.|....:||.:
Zfish   339 DCAEPPPCSTNRRCPKSHECLLDEWMCDGETDCKDGTDEKNCKESPVQCGEYQFSCSSKTQCIPQ 403

  Fly  1465 AALCDGRRQCPHGEDELGCDGSVKGGNACPEHTFRCGSGECLPEYEYCNAIVSCKDGSDE----P 1525
            :..|||...|..|.||..| .||    :||.|.|:|||.||:...:.||.:.:|.|||||    .
Zfish   404 SWRCDGSEDCRDGSDESAC-ASV----SCPPHLFQCGSSECVEFSQLCNGVTNCLDGSDEGGSCQ 463

  Fly  1526 PHLCGSRALPNLFMRLIEAGGLLG---------GGRREADA--------YCPHRCSNGLCRSTAI 1573
            ...|..:...........||...|         .|.|.||.        .|.|||:|.|   .:.
Zfish   464 TEKCSEQLKCAQDCHSTPAGARCGCRMGYKPVDDGLRCADVDECVERPNICSHRCNNTL---GSF 525

  Fly  1574 VCSGRDGCGDG----TDEQTCSV 1592
            .||    |..|    .|..:|.:
Zfish   526 QCS----CSHGYVLEPDGHSCKI 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_001261577.1 EB 75..131 CDD:279949
LDLa 1404..1437 CDD:238060 17/32 (53%)
LDLa 1448..1483 CDD:238060 12/34 (35%)
LDLa 1493..1524 CDD:238060 15/30 (50%)
LDLa 1561..1590 CDD:238060 10/32 (31%)
lrp13XP_021327248.1 LDLa 36..71 CDD:238060
LDLa 75..110 CDD:238060
LDLa 119..149 CDD:238060 8/24 (33%)
LDLa 195..223 CDD:238060 11/44 (25%)
LDLa 227..262 CDD:238060 7/60 (12%)
LDLa 271..301 CDD:238060 8/46 (17%)
LDLa 306..340 CDD:238060 19/34 (56%)
LDLa 351..380 CDD:238060 1/28 (4%)
LDLa 387..422 CDD:238060 12/34 (35%)
LDLa 427..458 CDD:197566 15/30 (50%)
EGF_CA 503..542 CDD:311536 12/45 (27%)
PHA02142 <569..>666 CDD:333147
LY <622..648 CDD:214531
Ldl_recept_b 680..718 CDD:278487
LY 702..744 CDD:214531
LY 744..786 CDD:214531
FXa_inhibition 818..848 CDD:317114
LY 976..1021 CDD:214531
FXa_inhibition 1130..1162 CDD:317114
LDLa 1170..1202 CDD:197566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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