DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and lrp13

DIOPT Version :10

Sequence 1:NP_524849.2 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:XP_068074315.1 Gene:lrp13 / 562438 ZFINID:ZDB-GENE-130729-1 Length:1355 Species:Danio rerio


Alignment Length:543 Identity:125/543 - (23%)
Similarity:167/543 - (30%) Gaps:195/543 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1120 IPELFAEAAKDEEDVPALPESDESKTEQPSALEVEQHIASEAEQTPVEDEHQYDEEEHQQDQEEH 1184
            :||.|.    .:.||..:..|||                :..|:.|.:|:   |::|...|::|.
Zfish   128 VPESFV----CDGDVDCVDGSDE----------------ANCEENPDDDD---DDDEDLLDEKEE 169

  Fly  1185 QQDEDEPLKEVETESLPEEATTEKFQEPEPEEVNTPLPEELPFDLTDHSDVNRFNELQSESLILE 1249
            ...|.|..:.|.....|               :...:..:|..|.||...:|..           
Zfish   170 MTGEHEVSQNVPATKGP---------------LRCSIASKLCRDGTDCVMLNHV----------- 208

  Fly  1250 STTNIDGLQELDNNHIEEEEPAAHAIPHEEATPNPADIVEITTQTMLG--LASRVTLMEPAAPVV 1312
                .||  |||.....:||..            |........|...|  ...|..|.:      
Zfish   209 ----CDG--ELDCKDGSDEEDC------------PVQCESGQFQCAHGKKCIDRRQLCD------ 249

  Fly  1313 TTLMPLMTADEPTPEPVSPAAIP-----SASLAAIKPGTELRKRVDLGLEAVSLGLACSSDRQCQ 1372
                                .:|     |..|...||..:...|.|.....|.....|..|.   
Zfish   250 --------------------GVPQCQDRSDELNCFKPDDDCAHRCDENTRCVPESFVCDGDP--- 291

  Fly  1373 LADPHTVCNRRGVCDCAAGEEGSQCSAERTGCSPGTFQCRSSGVCISWFFVCDGRADCNDASDEE 1437
                          ||..|.:.:.|..|  .||...:|| |||.|:|....|||.:||.|.||||
Zfish   292 --------------DCVDGSDEANCGEE--SCSSAEWQC-SSGQCVSLSMRCDGHSDCRDHSDEE 339

  Fly  1438 -------CTHNARLNQT-------------------------------CPTESFRCQRSGRCISR 1464
                   |:.|.|..::                               |....|.|....:||.:
Zfish   340 DCAEPPPCSTNRRCPKSHECLLDEWMCDGETDCKDGTDEKNCKESPVQCGEYQFSCSSKTQCIPQ 404

  Fly  1465 AALCDGRRQCPHGEDELGCDGSVKGGNACPEHTFRCGSGECLPEYEYCNAIVSCKDGSDE----P 1525
            :..|||...|..|.||..| .||    :||.|.|:|||.||:...:.||.:.:|.|||||    .
Zfish   405 SWRCDGSEDCRDGSDESAC-ASV----SCPPHLFQCGSSECVEFSQLCNGVTNCLDGSDEGGSCQ 464

  Fly  1526 PHLCGSRALPNLFMRLIEAGGLLG---------GGRREADA--------YCPHRCSNGLCRSTAI 1573
            ...|..:...........||...|         .|.|.||.        .|.|||:|.|   .:.
Zfish   465 TEKCSEQLKCAQDCHSTPAGARCGCRMGYKPVDDGLRCADVDECVERPNICSHRCNNTL---GSF 526

  Fly  1574 VCSGRDGCGDG----TDEQTCSV 1592
            .||    |..|    .|..:|.:
Zfish   527 QCS----CSHGYVLEPDGHSCKI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_524849.2 EB 75..131 CDD:460294
rne <795..981 CDD:236766
LDLa 1404..1437 CDD:238060 17/32 (53%)
LDLa 1448..1483 CDD:238060 12/34 (35%)
LDLa 1493..1524 CDD:238060 15/30 (50%)
lrp13XP_068074315.1 LDLa 36..71 CDD:238060
LDLa 75..110 CDD:238060
LDLa 119..149 CDD:238060 8/40 (20%)
LDLa 196..224 CDD:238060 11/44 (25%)
LDLa 228..263 CDD:238060 7/60 (12%)
LDLa 272..302 CDD:238060 8/46 (17%)
LDLa 307..341 CDD:238060 19/34 (56%)
LDLa 352..381 CDD:238060 1/28 (4%)
LDLa 388..423 CDD:238060 12/34 (35%)
LDLa 428..459 CDD:197566 15/30 (50%)
FXa_inhibition 508..543 CDD:464251 11/41 (27%)
LY <623..649 CDD:214531
Ldl_recept_b 681..719 CDD:459654
LY 703..745 CDD:214531
FXa_inhibition 1131..1163 CDD:464251
LDLa 1171..1203 CDD:197566
Blue background indicates that the domain is not in the aligned region.

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