DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and lrp8

DIOPT Version :10

Sequence 1:NP_524849.2 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:XP_073809120.1 Gene:lrp8 / 557734 ZFINID:ZDB-GENE-050506-134 Length:1008 Species:Danio rerio


Alignment Length:366 Identity:97/366 - (26%)
Similarity:122/366 - (33%) Gaps:135/366 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1327 EPVSPAAIPSASLAAIKPGTELRKRVDLG---LEAVSLGLACSSDRQCQLADPHTVCNRRGVCDC 1388
            ||..|.....|..|..:. |...::.|.|   .:.|||...|..:|                 ||
Zfish    89 EPECPDGSDEADSACSRQ-TCPPEKFDCGGSTSKCVSLSWRCDGER-----------------DC 135

  Fly  1389 AAGEEGSQCSAERTGCSPGTFQCRSSGVCISWFFVCDGRADCNDASDEE-CT---------HNAR 1443
            ..|.:..||:|:...|....||||:. :|::..|||||..||.|.|||| ||         |..|
Zfish   136 ENGADEEQCAADAKACPAKEFQCRNR-MCVAPTFVCDGDDDCGDRSDEEKCTAATASTCGPHEFR 199

  Fly  1444 LNQT------------------------------------CPTESFRCQRSGRCISRAALCDGRR 1472
            .|.:                                    |....||| |||.||.....|||..
Zfish   200 CNDSECIPTPWSCDGDPDCRDKSDESLERCSRRTEPQKPHCSMGEFRC-RSGECIHLNWKCDGDP 263

  Fly  1473 QCPHGEDELGC-------------DGSVKGG-------NACPEHT-----------------FRC 1500
            .|....||..|             |||...|       :.||:.:                 |.|
Zfish   264 DCKDKSDEANCPVLTCRPDQFQCGDGSCIHGTKQCNKVHDCPDFSDEAGCVNRTNKCEGPLKFMC 328

  Fly  1501 GSGECLPEYEYCNAIVSCKDGSDEPPHLCGSRALPNLFMRLIEAGGLLGGGRREADAYCPHRCSN 1565
            .||||:...:.|:.|..|||.||||...||           :....:..||       |.|.|.:
Zfish   329 KSGECIDSSKVCDTIRDCKDWSDEPVKECG-----------LNECAINNGG-------CSHICKD 375

  Fly  1566 GLCRSTAIVCSGRDGCGDG---TDEQTC-SVCRCPAPTAAS 1602
               |.....|.    |..|   .|::|| .:..|..|.|.|
Zfish   376 ---RQIGFECQ----CPSGYKLLDKKTCGDIDECENPEACS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_524849.2 EB 75..131 CDD:460294
rne <795..981 CDD:236766
LDLa 1404..1437 CDD:238060 16/32 (50%)
LDLa 1448..1483 CDD:238060 15/34 (44%)
LDLa 1493..1524 CDD:238060 14/47 (30%)
lrp8XP_073809120.1 None
Blue background indicates that the domain is not in the aligned region.

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