DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and arr

DIOPT Version :10

Sequence 1:NP_524849.2 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:NP_524737.2 Gene:arr / 44279 FlyBaseID:FBgn0000119 Length:1678 Species:Drosophila melanogaster


Alignment Length:262 Identity:70/262 - (26%)
Similarity:90/262 - (34%) Gaps:100/262 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1365 CSSDR-QCQ---LADPHTVCNRRGVCDCAAG----EEGSQCSAERTGCSPGTFQCRS--SGV--- 1416
            |...| :|.   :|....:...|.||.|...    |:...|.| ...|.|..|.|.:  ||:   
  Fly  1273 CMHSRTKCSHICIASGEGIARTRDVCSCPKHLMLLEDKENCGA-FPACGPDHFTCAAPVSGISDV 1336

  Fly  1417 ---CISWFFVCDGRADCNDASDE-ECTHNARLNQTCPTESFRCQRSGRCISRAALCDGRRQCPHG 1477
               ||...:.|||:.||.|.||| .|       .||..:.|.|| ||.||.::.:|||...|.:|
  Fly  1337 NKDCIPASWRCDGQKDCPDKSDEVGC-------PTCRADQFSCQ-SGECIDKSLVCDGTTNCANG 1393

  Fly  1478 EDELGCDGSVKGGNACPEHTFRCGSGECLPEYEYCNAIVSCKDGSDEPPHLCGSRALPNLFMRLI 1542
            .||..|                                  ||                       
  Fly  1394 HDEADC----------------------------------CK----------------------- 1401

  Fly  1543 EAGGLLGGGRREADAYCPHRCSNGLCRSTAIVCSGRDGCGDGTDEQTCSVC--RCPAPTAASLPA 1605
                      |..:..||   .|.||.|.|::|.|.:.|.||.||.: .:|  |..|| |....|
  Fly  1402 ----------RPGEFQCP---INKLCISAALLCDGWENCADGADESS-DICLQRRMAP-ATDKRA 1451

  Fly  1606 FL 1607
            |:
  Fly  1452 FM 1453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_524849.2 EB 75..131 CDD:460294
rne <795..981 CDD:236766
LDLa 1404..1437 CDD:238060 17/41 (41%)
LDLa 1448..1483 CDD:238060 15/34 (44%)
LDLa 1493..1524 CDD:238060 2/30 (7%)
arrNP_524737.2 LY 162..201 CDD:214531
NHL 168..503 CDD:302697
NHL repeat 172..237 CDD:271320
LY 252..293 CDD:214531
NHL repeat 261..298 CDD:271320
NHL repeat 303..339 CDD:271320
NHL repeat 341..419 CDD:271320
NHL repeat 428..476 CDD:271320
LY 472..511 CDD:214531
NHL repeat 477..503 CDD:271320
Ldl_recept_b 534..574 CDD:459654
LY 558..599 CDD:214531
LY 600..641 CDD:214531
FXa_inhibition 668..703 CDD:464251
YncE <736..886 CDD:442618
LY 776..818 CDD:214531
LY 905..946 CDD:214531
FXa_inhibition 973..1010 CDD:464251
YncE <1047..1191 CDD:442618
LDLa 1319..1362 CDD:238060 17/42 (40%)
LDLa 1365..1399 CDD:238060 15/34 (44%)
LDLa 1399..1433 CDD:197566 16/103 (16%)
Blue background indicates that the domain is not in the aligned region.

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