DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and dgcr2

DIOPT Version :10

Sequence 1:NP_524849.2 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:XP_073769891.1 Gene:dgcr2 / 436929 ZFINID:ZDB-GENE-040718-404 Length:543 Species:Danio rerio


Alignment Length:172 Identity:42/172 - (24%)
Similarity:62/172 - (36%) Gaps:53/172 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1378 TVC----------NRRGVCDCAAGEEGSQCSAER----TGCSPGTFQCRSSGV-CISWFFVCDGR 1427
            |||          :...:.:|.....|.:.:..|    ..|:||.|.|||..: ||...:.|||.
Zfish     7 TVCLTCERLVDEKSASSISECVCLSAGPRLALARLLTDLRCNPGQFACRSGKLQCIPSTWQCDGW 71

  Fly  1428 ADCNDASDEECTHNARLNQTCPTESFRCQRSGRCISRAALCDGRRQCPHG----EDELGCDGSVK 1488
            ..|.|.|||         ..|||                :.:.|.:..:|    ||.:|....|:
Zfish    72 TACEDKSDE---------IDCPT----------------IKEERYRYSNGLEPVEDVMGVAQPVR 111

  Fly  1489 GGNACPE--HTFRCGSGECLPEY----EYCNAIVSCK--DGS 1522
            ....||.  |.:. .:..|...|    .|..|:.:|:  :||
Zfish   112 FNKKCPSGWHHYE-KTASCYKVYLRSENYWQAVETCQKVNGS 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_524849.2 EB 75..131 CDD:460294
rne <795..981 CDD:236766
LDLa 1404..1437 CDD:238060 16/33 (48%)
LDLa 1448..1483 CDD:238060 7/38 (18%)
LDLa 1493..1524 CDD:238060 10/38 (26%)
dgcr2XP_073769891.1 None
Blue background indicates that the domain is not in the aligned region.

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