Sequence 1: | NP_001261577.1 | Gene: | ImpE1 / 45879 | FlyBaseID: | FBgn0001253 | Length: | 1616 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001128355.1 | Gene: | Lrp12 / 314941 | RGDID: | 1304943 | Length: | 858 | Species: | Rattus norvegicus |
Alignment Length: | 361 | Identity: | 71/361 - (19%) |
---|---|---|---|
Similarity: | 93/361 - (25%) | Gaps: | 179/361 - (49%) |
- Green bases have known domain annotations that are detailed below.
Fly 1375 DPHTVCNR----RGVC-----DCAAGEEGSQCSAERT--------------GCSPGTFQCRSS-- 1414
Fly 1415 --GVCISWFFVCDGRADCNDASDE--------------------------------ECT------ 1439
Fly 1440 ------------------------------HNAR------------------------------- 1443
Fly 1444 -------LNQTCPTESF------RCQRSGRCISRAALCDGRRQCPHGEDELGCDGSVKGGNACPE 1495
Fly 1496 HTFRCG-SGECLPEYEYCNAIVSCKDGSDEPPHLCGSRALPNLFMRLIEAGGLLGGGRREADAYC 1559
Fly 1560 P---HRCSNGLCRSTAIVCSGRDGCGDGTDEQTCSV 1592 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ImpE1 | NP_001261577.1 | EB | 75..131 | CDD:279949 | |
LDLa | 1404..1437 | CDD:238060 | 14/68 (21%) | ||
LDLa | 1448..1483 | CDD:238060 | 11/40 (28%) | ||
LDLa | 1493..1524 | CDD:238060 | 11/31 (35%) | ||
LDLa | 1561..1590 | CDD:238060 | 12/28 (43%) | ||
Lrp12 | NP_001128355.1 | CUB | 47..158 | CDD:238001 | |
LDLa | 166..200 | CDD:238060 | 7/33 (21%) | ||
LDLa | 215..254 | CDD:238060 | 14/38 (37%) | ||
CUB | 267..371 | CDD:238001 | 6/103 (6%) | ||
LDLa | 375..410 | CDD:238060 | 10/34 (29%) | ||
LDLa | 413..448 | CDD:238060 | 13/44 (30%) | ||
LDLa | 451..485 | CDD:238060 | 13/33 (39%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |