DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and Lrp8

DIOPT Version :9

Sequence 1:NP_001261577.1 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:XP_011238756.1 Gene:Lrp8 / 16975 MGIID:1340044 Length:1010 Species:Mus musculus


Alignment Length:362 Identity:99/362 - (27%)
Similarity:126/362 - (34%) Gaps:116/362 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1273 HAIPH------EEATPNPADIVEITTQTMLGLASRVTLMEPAAPVVTTLMPLMTADEPTPEPVSP 1331
            |.||.      ||..|:.:|            .|:.|......|          |::.:..|.|.
Mouse    91 HCIPERWKCDGEEECPDGSD------------ESKATCSSEECP----------AEKLSCGPTSH 133

  Fly  1332 AAIPSASLAAIKPGTELRKRVDLGLEAVSLGLACSSDRQCQ----------LADPHTV-CNRRG- 1384
            ..:|::                         ..|..::.|:          |..||.. |:.|. 
Mouse   134 KCVPAS-------------------------WRCDGEKDCEGGADEAGCPTLCAPHEFQCSNRSC 173

  Fly  1385 -----VC----DCAAGEEGSQCSAERTGCSPGTFQCRSSGVCISWFFVCDGRADCNDASDEECTH 1440
                 ||    ||..|.:...||  ...|.|..|:|...|.||...:|||.:.||.|.|||....
Mouse   174 LASVFVCDGDDDCGDGSDERGCS--DPACPPREFRCGGGGTCIPERWVCDRQFDCEDRSDEAAEL 236

  Fly  1441 NARLNQ-------TC-PTESFRCQRSGRCISRAALCDGRRQCPHGEDELGCDGSVKGGNACPEHT 1497
            ..|..|       .| ||..|.| |||.||.....|||.|.|....||..|  |..|  .|.|:.
Mouse   237 CGRAGQGTTATPAACAPTAQFTC-RSGECIHLGWRCDGDRDCKDKSDEADC--SAPG--PCRENE 296

  Fly  1498 FRCGSGECLPEYEYCNAIVSCKDGSDEPPHLCGSRALPNLFMRLIEAGGLLGGGRREADAYCPHR 1562
            |:||.|.|:...:.||....|.||||                   |||.|     :|:....|.|
Mouse   297 FQCGDGTCVLAIKRCNQERDCPDGSD-------------------EAGCL-----QESTCEGPRR 337

  Fly  1563 --CSNGLCRSTAIVCSGRDGCGDGTDEQTCSVCRCPA 1597
              |.:|.|.....||..:..|.|.:||.. .||..|:
Mouse   338 FQCKSGECVDGGKVCDDQRDCRDWSDEPQ-KVCVAPS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_001261577.1 EB 75..131 CDD:279949
LDLa 1404..1437 CDD:238060 15/32 (47%)
LDLa 1448..1483 CDD:238060 17/35 (49%)
LDLa 1493..1524 CDD:238060 13/30 (43%)
LDLa 1561..1590 CDD:238060 10/30 (33%)
Lrp8XP_011238756.1 LDLa 41..75 CDD:238060
LDLa 79..111 CDD:197566 7/31 (23%)
LDLa 121..157 CDD:238060 7/70 (10%)
LDLa 200..232 CDD:197566 14/31 (45%)
LDLa 256..286 CDD:238060 14/30 (47%)
LDLa 292..326 CDD:238060 16/52 (31%)
LDLa 330..366 CDD:381805 11/35 (31%)
FXa_inhibition 387..421 CDD:373209
EGF_CA 423..453 CDD:214542
LY 492..527 CDD:214531
LY 537..578 CDD:214531
Ldl_recept_b 599..639 CDD:278487
LY 623..665 CDD:214531
Ldl_recept_b 686..725 CDD:278487
FXa_inhibition 744..781 CDD:373209
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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