DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and Lrp6

DIOPT Version :9

Sequence 1:NP_001261577.1 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:NP_032540.2 Gene:Lrp6 / 16974 MGIID:1298218 Length:1613 Species:Mus musculus


Alignment Length:394 Identity:89/394 - (22%)
Similarity:137/394 - (34%) Gaps:132/394 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1227 FDLTDHSDVNRFNELQSESLILE----------STTNIDGLQELDNNHI------EEEEPAAHAI 1275
            |::..:|..|:..|:|...|.::          ..||:..:..||...:      |::.|.|..:
Mouse  1000 FNVVANSVANQNLEIQPYDLSIDIYSRYIYWTCEATNVIDVTRLDGRSVGVVLKGEQDRPRAIVV 1064

  Fly  1276 PHE----------EATPN-------------------------------------PADIVEITTQ 1293
            ..|          |.:|.                                     .:|:..|.:.
Mouse  1065 NPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSKLGKLFWADSDLRRIESS 1129

  Fly  1294 TMLGLASRVTLMEPAAPVVTTLMPLMTADEPTPEPVSPAAIPSASLAAIKPGTELRKRVDL-GLE 1357
            .:.| |:|:.|                .|....:||......: .|..|....::.:::|: |.|
Mouse  1130 DLSG-ANRIVL----------------EDSNILQPVGLTVFEN-WLYWIDKQQQMIEKIDMTGRE 1176

  Fly  1358 AVSLGLACSSDRQCQLADPHTV------------CNR-RGVCD--C-AAGEEGSQCS-------- 1398
                |......|..||:|.|.|            |.: .|.|.  | ..|:..::||        
Mouse  1177 ----GRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLL 1237

  Fly  1399 ------AERTGCSPGTFQCRSSGV-CISWFFVCDGRADCNDASDEECTHNARLN-QTCPTESFRC 1455
                  .|...|||..|.|.:..: ||...:.|||..:|.|.|||       || ..|....|:|
Mouse  1238 QDELSCGEPPTCSPQQFTCFTGDIDCIPVAWRCDGFTECEDHSDE-------LNCPVCSESQFQC 1295

  Fly  1456 QRSGRCISRAALCDGRRQCPHGEDELGCDGSVKGGNACPEHTFRCGSGECLPEYEYCNAIVSCKD 1520
             .||:||..|..|:|...|....||..|:      ..|....|||.:|:|:.:::.|:..|.|.|
Mouse  1296 -ASGQCIDGALRCNGDANCQDKSDEKNCE------VLCLIDQFRCANGQCVGKHKKCDHSVDCSD 1353

  Fly  1521 GSDE 1524
            .|||
Mouse  1354 RSDE 1357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_001261577.1 EB 75..131 CDD:279949
LDLa 1404..1437 CDD:238060 14/33 (42%)
LDLa 1448..1483 CDD:238060 13/34 (38%)
LDLa 1493..1524 CDD:238060 11/30 (37%)
LDLa 1561..1590 CDD:238060
Lrp6NP_032540.2 Beta-propeller 1 20..275
NHL 55..272 CDD:302697
NHL repeat 55..93 CDD:271320
LY 89..127 CDD:214531
NHL repeat 97..132 CDD:271320
NHL repeat 140..176 CDD:271320
Ldl_recept_b 150..190 CDD:278487
LY 175..216 CDD:214531
NHL repeat 181..217 CDD:271320
NHL repeat 226..253 CDD:271320
LDL-receptor class B 5 236..277
FXa_inhibition 286..323 CDD:291342
Beta-propeller 2 328..589
LY 353..393 CDD:214531
LY 397..437 CDD:214531
LY 438..481 CDD:214531
LY 483..524 CDD:214531
LY 525..558 CDD:214531
FXa_inhibition 592..627 CDD:291342
Beta-propeller 3 631..890
LY 656..694 CDD:214531
LY 697..739 CDD:214531
LY 740..783 CDD:214531
LY 783..825 CDD:214531
LY 827..866 CDD:214531
FXa_inhibition 893..929 CDD:291342
Beta-propeller 4 933..1202 37/223 (17%)
LY 958..998 CDD:214531
LY 1050..1093 CDD:214531 6/42 (14%)
LY 1094..1136 CDD:214531 4/42 (10%)
FXa_inhibition 1207..1243 CDD:291342 7/35 (20%)
LDLa 1249..1285 CDD:238060 16/42 (38%)
LDLa 1288..1322 CDD:238060 13/34 (38%)
LDLa 1326..1360 CDD:238060 13/32 (41%)
PPPSP motif A 1487..1493
PPPSP motif B 1527..1534
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1556..1613
PPPSP motif C 1568..1575
PPPSP motif D 1588..1593
PPPSP motif E 1603..1610
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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