DRSC/TRiP Functional Genomics Resources

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Protein Alignment ImpE1 and LDLRAD3

DIOPT Version :10

Sequence 1:NP_524849.2 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster
Sequence 2:NP_777562.1 Gene:LDLRAD3 / 143458 HGNCID:27046 Length:345 Species:Homo sapiens


Alignment Length:165 Identity:49/165 - (29%)
Similarity:72/165 - (43%) Gaps:27/165 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1334 IPSASLAAIKPGTELRKRVDLGLEAVSLGLACSSDR------QCQLADPHTVCNRRGVCDCAAGE 1392
            :.||:.:.:.||.......:     :.....||:.|      ||.           |:.||....
Human    11 LSSAAESQLLPGNNFTNECN-----IPGNFMCSNGRCIPGAWQCD-----------GLPDCFDKS 59

  Fly  1393 EGSQCSAERTGCSPGTFQCRSSGVCISWFFVCDGRADCNDASDEE-CTHNARLNQTCPTESFRCQ 1456
            :..:|...::.|.|..|.|.|...||...|.|:|..||.|.|||| ||.|..|   |.|..:.| 
Human    60 DEKECPKAKSKCGPTFFPCASGIHCIIGRFRCNGFEDCPDGSDEENCTANPLL---CSTARYHC- 120

  Fly  1457 RSGRCISRAALCDGRRQCPHGEDELGCDGSVKGGN 1491
            ::|.||.::.:|||:..|....||..|:.|.:.|:
Human   121 KNGLCIDKSFICDGQNNCQDNSDEESCESSQEPGS 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpE1NP_524849.2 EB 75..131 CDD:460294
rne <795..981 CDD:236766
LDLa 1404..1437 CDD:238060 15/32 (47%)
LDLa 1448..1483 CDD:238060 12/34 (35%)
LDLa 1493..1524 CDD:238060
LDLRAD3NP_777562.1 (Microbial infection) Interaction with Venezuelan equine encephalitis virus/VEEV spike proteins E1 and E2. /evidence=ECO:0000269|PubMed:34646021 30..57 8/42 (19%)
LDLa 32..64 CDD:238060 8/42 (19%)
LDLa 71..106 CDD:238060 17/34 (50%)
LDLa 113..147 CDD:238060 12/34 (35%)
Involved in ITCH interaction. /evidence=ECO:0000269|PubMed:26854353 256..259
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..345
Involved in ITCH interaction. /evidence=ECO:0000269|PubMed:26854353 275..278
Blue background indicates that the domain is not in the aligned region.

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