DRSC/TRiP Functional Genomics Resources

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Protein Alignment grau and zgc:101562

DIOPT Version :10

Sequence 1:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001116777.1 Gene:zgc:101562 / 792098 ZFINID:ZDB-GENE-041010-74 Length:246 Species:Danio rerio


Alignment Length:247 Identity:58/247 - (23%)
Similarity:96/247 - (38%) Gaps:44/247 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 IQEHARRHE---NPEYIKCKDCGKVFANSSVLRAHWLVHHVPDEECDFQCEDCGKRFSRRNLLEL 344
            :.|...:||   .|..:|.:| .:|.:......|.......|.....:.|..|||.||.......
Zfish    23 VMEPLEKHEEIPKPRQVKTED-EEVLSMFHKEEAERKSRRTPRGTKPYYCTQCGKSFSVAARFRR 86

  Fly   345 HKGSHVPVNERKFICPQCPKHNAFATEYHMQVHISMQHRKAA---NICHVCGKKIKDKAVFEKHV 406
            |:..|  ...|.:.||.|  |..|.::.::..|::..|.:|:   :.|..|||..........|:
Zfish    87 HQRIH--SGHRPYQCPLC--HTGFTSQENLSEHLAHAHTQASSKPHRCTHCGKGFVRPGKLCIHM 147

  Fly   407 RLHFEESGPRIKCPRPDCESWLKDEDNLKQHLRRHNDEGKLFICSECGKSCKNSRALIGHKRYSH 471
            |:|..|                          |.|.       |::||||.|::..|..|.....
Zfish   148 RVHTGE--------------------------RPHR-------CADCGKSFKSAGELQRHTAIHT 179

  Fly   472 SNVIYTCEQCGKTFKKDISLKEHMAQHTGEPLYKCPFCPRTFNSNANMHSHK 523
            ....:.|.:|..:|::...|..||..|:||..::|..|.|.::.:.::.||:
Zfish   180 EIKTHQCSECESSFRRSTHLLRHMRTHSGERPHQCMSCGRRYSRSDHLRSHR 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grauNP_788422.1 zf-AD 3..74 CDD:462262
C2H2 Zn finger 272..290 CDD:275368 1/6 (17%)
COG5048 <296..453 CDD:227381 33/159 (21%)
C2H2 Zn finger 298..318 CDD:275368 3/19 (16%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 359..409 CDD:275368 14/52 (27%)
C2H2 Zn finger 360..378 CDD:275370 4/17 (24%)
zf-C2H2_8 419..502 CDD:464935 18/82 (22%)
C2H2 Zn finger 450..471 CDD:275368 8/20 (40%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 506..524 CDD:275368 5/18 (28%)
zgc:101562NP_001116777.1 C2H2 Zn finger 71..91 CDD:275368 7/19 (37%)
SFP1 <93..174 CDD:227516 26/115 (23%)
C2H2 Zn finger 130..150 CDD:275368 6/19 (32%)
C2H2 Zn finger 158..178 CDD:275368 8/19 (42%)
COG5048 182..>237 CDD:227381 14/50 (28%)
C2H2 Zn finger 186..206 CDD:275368 6/19 (32%)
C2H2 Zn finger 214..234 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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