DRSC/TRiP Functional Genomics Resources

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Protein Alignment grau and CG11902

DIOPT Version :10

Sequence 1:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster


Alignment Length:617 Identity:126/617 - (20%)
Similarity:197/617 - (31%) Gaps:214/617 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CNVCWTQVSEFHQFYV------SIQEAQVIYAT-TSKFKQDPEMVNTS----------------- 93
            ||:|.|.|...||.|.      ..:||.::.:. .::|..:..:.:.|                 
  Fly   866 CNLCTTVVKRKHQLYAHQLEEHKWEEAVLVCSNCQTRFVNESLLDHHSRTLCHNPQKLFQCRKCP 930

  Fly    94 ----WPEEVLMPADVLAVDNDVGAQINVNPLD--------------ELDLSQP--MSPEDSKV-- 136
                |.|.:.:..:|..:.:::..|.::..:|              :.||::.  |..::|.:  
  Fly   931 LRFRWRENLKLHMEVFHMLDELSIQDDLPKVDGDLQCGKCNRSFRMQKDLTRHTLMHGQESNIFR 995

  Fly   137 ---------------------GIKTERQSPDMELLFEDANNEQDEDYEDDEDDDTDDLIVTRSGR 180
                                 ||... |.|..|.:.                    |..|...||
  Fly   996 CRWCARRFYRRANLLQHIARHGISVS-QLPYAEAIL--------------------DSYVNPGGR 1039

  Fly   181 K----RKRDVAKPAKTKRGTVSVGRKGKEKMVVKRGPPKRIFKMERLPPFCKEDEELIKRYIV-- 239
            |    |..:|:.|      |::..|                ..:|.:|.....|...::.|.:  
  Fly  1040 KKVECRVCNVSFP------TIAALR----------------LHLETMPAGSHHDYSSLQNYSITN 1082

  Fly   240 -MGCELCIFLAE-DFDGIREHFKDKHPDERPYIKCCG----------------------RKLNKR 280
             ||.|:.::.:| |.:..|.|.|   |...|....|.                      .|::..
  Fly  1083 QMGFEMDLYDSETDDEDSRTHIK---PPGAPSSYTCNMCQLRCLRKFELYQHQQAMHRMEKISDG 1144

  Fly   281 C-----------LIQEHARRH-ENPE-YIKCKDCGKVFANSSVLRAHWLVHHV--PDEECD---- 326
            |           :|..|.|.. ||.| ..||..||..|...|.|..|..:.||  .|:|.|    
  Fly  1145 CDSCLFKSVCPEIISHHKRTQCENREKQFKCTRCGYKFMWESNLLLHMDLQHVKTEDQELDESKE 1209

  Fly   327 ------------FQCEDCGKRFSRRNLLELHKGSHVPVNERKFICPQCPKHNAFATEYHMQVHIS 379
                        |||..|.::::|::.|..|.        :||..|.|....|            
  Fly  1210 ASGDEPKTEGQVFQCGLCTRKYNRKDRLTAHL--------KKFHGPDCKPSTA------------ 1254

  Fly   380 MQHRKAAN-----------ICHVCGKKIKDKAVFEKHVRLHFEESGPRIKCPRPDCESWLKDEDN 433
                |..|           :|..|||.:...:....|:|.|..|.  ..||..  |........:
  Fly  1255 ----KTPNRPISPKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEK--PFKCEY--CTMAFPRSSD 1311

  Fly   434 LKQHLRRHNDEGKLFICSECGKSCKNSRALIGHKRYSHSNVIYTCEQCGKTFKKDISLKEHMAQH 498
            |:.|.|.|..| :..:|:.|.|....|..|..|.|.......|.|..|.|:|.:...|..|:.:|
  Fly  1312 LQCHRRTHTGE-RPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRH 1375

  Fly   499 TGEPLYKCPFCPRTFNSNANMHSHKKKMHPVE 530
            |||..|:|..|...|.....:.:|:.:....|
  Fly  1376 TGERPYQCGVCGERFIQGTALKNHRMQQSHYE 1407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grauNP_788422.1 zf-AD 3..74 CDD:462262 9/26 (35%)
C2H2 Zn finger 272..290 CDD:275368 6/50 (12%)
COG5048 <296..453 CDD:227381 44/185 (24%)
C2H2 Zn finger 298..318 CDD:275368 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 5/19 (26%)
C2H2 Zn finger 359..409 CDD:275368 11/60 (18%)
C2H2 Zn finger 360..378 CDD:275370 3/17 (18%)
zf-C2H2_8 419..502 CDD:464935 24/82 (29%)
C2H2 Zn finger 450..471 CDD:275368 7/20 (35%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 506..524 CDD:275368 4/17 (24%)
CG11902NP_651389.3 zf-AD 6..83 CDD:462262
C2H2 Zn finger 208..228 CDD:275370
C2H2 Zn finger 236..256 CDD:275370
C2H2 Zn finger 384..405 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 447..463 CDD:275368
C2H2 Zn finger 578..599 CDD:275368
C2H2 Zn finger 610..629 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
SUF4-like 673..>726 CDD:411020
C2H2 Zn finger 676..703 CDD:411020
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 706..726 CDD:411020
C2H2 Zn finger 706..726 CDD:275368
C2H2 Zn finger 762..782 CDD:275368
C2H2 Zn finger 866..887 CDD:275368 8/20 (40%)
C2H2 Zn finger 896..918 CDD:275368 2/21 (10%)
C2H2 Zn finger 926..947 CDD:275368 3/20 (15%)
C2H2 Zn finger 967..987 CDD:275368 2/19 (11%)
C2H2 Zn finger 996..1016 CDD:275368 0/19 (0%)
C2H2 Zn finger 1044..1063 CDD:275368 5/40 (13%)
C2H2 Zn finger 1224..1244 CDD:275368 5/27 (19%)
C2H2 Zn finger 1271..1291 CDD:275368 6/19 (32%)
zf-H2C2_2 1283..1306 CDD:463886 7/26 (27%)
C2H2 Zn finger 1299..1319 CDD:275368 5/21 (24%)
C2H2 Zn finger 1327..1347 CDD:275368 7/19 (37%)
zf-H2C2_2 1340..1364 CDD:463886 8/23 (35%)
SFP1 <1349..1405 CDD:227516 16/55 (29%)
C2H2 Zn finger 1355..1375 CDD:275368 6/19 (32%)
C2H2 Zn finger 1383..1401 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

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