DRSC/TRiP Functional Genomics Resources

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Protein Alignment grau and CG11247

DIOPT Version :10

Sequence 1:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:440 Identity:108/440 - (24%)
Similarity:181/440 - (41%) Gaps:92/440 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 DVLAVDNDVGAQINVNPLDELDLSQPMSPEDSKVG--IKTERQSPDMELLFEDANNEQDEDYEDD 165
            |.:::..|.|          :.||.|.:..:|..|  :..:|:...:..| .||..:::|| :..
  Fly    12 DAVSLLTDSG----------ISLSSPPAARESSPGPTLAIKRRKSSLASL-RDACVDEEED-DGG 64

  Fly   166 EDDDTDDLIVTRSGRKRKRDVAKPAKTKRGTVSVGRKGKEKMVVKRGPPKRIFKMERLPPFCKED 230
            |.|..||            |..:|...|.     .|||:        |.||              
  Fly    65 EQDSKDD------------DYVQPQLKKS-----ARKGE--------PVKR-------------- 90

  Fly   231 EELIKRYIVMGCELCIFLAEDFDG---IREHFKDKHPDERPYIKC--CGRKLNKRCLIQEH-ARR 289
                |.::   |..|   :::|.|   ::.|.. .|.||||: ||  ||:...:...::.| ...
  Fly    91 ----KHHV---CSQC---SKEFGGKTDLQRHML-IHSDERPH-KCKDCGKSYRQAVNLKNHITTA 143

  Fly   290 HENPEYIKCKDCGKVFANSSVLRAHWLVHHVPDEECDFQCEDCGKRFSRRNLLELHKGSHVPVNE 354
            ||:.:...|..|.|.||....||.|..:|   ..|..:.|:.|.|:|:|...|:.|..||...:.
  Fly   144 HEHRKQFVCSQCPKSFALKERLRLHMRLH---SGEKPYPCDLCDKKFARGGQLQQHMVSHHKTSI 205

  Fly   355 RKFICPQCPKHNAFATEYHMQVHI-----SMQHRKAANICHVCGKKIKDKAVFEKHVRLHFEESG 414
            ::|.|.:|..  :|:|..:::||:     .|:||     |.:|..:..::.....|:.....:. 
  Fly   206 QQFNCTKCSA--SFSTNANLRVHMERHEQGMEHR-----CSICENQFANELALRAHINQEHHKL- 262

  Fly   415 PRIKCPRPDCESWLKDEDNLKQHLRRHNDEGKLFICSECGKSCKNSRALIGHKRYSHSNVIYTCE 479
            .:.:|  ..|...::.:::|..|::||. ..|..:|..|............|.|.......|.|.
  Fly   263 TQFEC--EICHKMIEPDEDLATHMQRHT-AVKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCR 324

  Fly   480 QCGKTFKKDISLKEHMAQHTGEPLYKCPFCPR--TFNSNANMHSHKKKMH 527
            .|.:||.....||.|:.:||||..::|..|..  .|:..|::.:|.||:|
  Fly   325 ICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAHLKNHMKKIH 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grauNP_788422.1 zf-AD 3..74 CDD:462262
C2H2 Zn finger 272..290 CDD:275368 4/20 (20%)
COG5048 <296..453 CDD:227381 40/161 (25%)
C2H2 Zn finger 298..318 CDD:275368 8/19 (42%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 359..409 CDD:275368 12/54 (22%)
C2H2 Zn finger 360..378 CDD:275370 4/17 (24%)
zf-C2H2_8 419..502 CDD:464935 22/82 (27%)
C2H2 Zn finger 450..471 CDD:275368 4/20 (20%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 506..524 CDD:275368 5/19 (26%)
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 51/194 (26%)
C2H2 Zn finger 95..115 CDD:275368 5/23 (22%)
C2H2 Zn finger 123..144 CDD:275368 4/20 (20%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 44/187 (24%)
C2H2 Zn finger 210..230 CDD:275370 6/21 (29%)
C2H2 Zn finger 238..260 CDD:275371 3/21 (14%)
C2H2 Zn finger 267..287 CDD:275368 4/21 (19%)
C2H2 Zn finger 295..315 CDD:275368 4/19 (21%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..374 CDD:275368 7/22 (32%)
C2H2 Zn finger 382..399 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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