DRSC/TRiP Functional Genomics Resources

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Protein Alignment grau and CG10959

DIOPT Version :10

Sequence 1:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster


Alignment Length:401 Identity:91/401 - (22%)
Similarity:142/401 - (35%) Gaps:102/401 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 QPMSPEDSKVGIKTERQSPDMELLFEDANNEQDEDYEDDEDDDTDDLIVTRSGRKRKRDVAKPAK 191
            |.:|.|...|....:...|:.::|.|:.:.||:...|.||.:....:::   |.|:..|      
  Fly    87 QGVSAEPLAVDSFKKEYLPNEDVLSEEEDAEQELGLEQDEGNPLRIMVL---GGKQSVD------ 142

  Fly   192 TKRGTVSVGRKGKEKMVVKRGPPKRIFKMERLPPFCKEDEELIKRYIVMGCELCIFLAEDFDGIR 256
                                        .|.:....:.|.:.....:..||.|     |...|: 
  Fly   143 ----------------------------EETIDTMWQPDHDSSSASVNEGCAL-----EALLGV- 173

  Fly   257 EHFKDKHPDERPYIKCCGRKLNKRCLIQEHA---RRHENPEYIKCKDCGKVFANSSVLRAHWLVH 318
            |:.:|..|||..               :||.   ::...|:...|..|.:.:.....|..|..:.
  Fly   174 ENPQDYQPDEDG---------------EEHQSVFKKQRQPKDYNCPHCDRRYTTQKYLNTHLKMS 223

  Fly   319 HVPDEECDFQCEDCGKRFSRRNLLELHKGSHVPVNERKFICPQCPKHNAFATEYHMQVHISMQHR 383
            | |..:. |:|.||...|.....|..|:        ||       :|..||              
  Fly   224 H-PFPQA-FKCVDCKATFDVDRALAQHR--------RK-------EHTEFA-------------- 257

  Fly   384 KAANICHVCGKKIKDKAVFEKHVRLHFEESGPR-IKCPRPDCESWLKDEDNLKQHLRRHNDEGKL 447
                 |.:|.|..|......:||:.|   ||.| .||...:|.....::.||..|.|.|::| :.
  Fly   258 -----CQLCDKVFKSSRSLLRHVQGH---SGARTFKCEHENCGKSFVNQHNLTSHRRVHSEE-RN 313

  Fly   448 FICSECGKSCKNSRALIGHKRYSHSNVIYTCEQCGKTFKKDISLKEHMAQHTGEPLYKCPFCPRT 512
            ::|..||...:...|||.|:|.......:.|:.|.:.|.....|.||.|.|:.|..|||..|...
  Fly   314 YVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSA 378

  Fly   513 FNSNANMHSHK 523
            |:....::.||
  Fly   379 FSRPKALYHHK 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grauNP_788422.1 zf-AD 3..74 CDD:462262
C2H2 Zn finger 272..290 CDD:275368 2/20 (10%)
COG5048 <296..453 CDD:227381 38/157 (24%)
C2H2 Zn finger 298..318 CDD:275368 4/19 (21%)
C2H2 Zn finger 329..349 CDD:275368 6/19 (32%)
C2H2 Zn finger 359..409 CDD:275368 9/49 (18%)
C2H2 Zn finger 360..378 CDD:275370 3/17 (18%)
zf-C2H2_8 419..502 CDD:464935 24/82 (29%)
C2H2 Zn finger 450..471 CDD:275368 8/20 (40%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 506..524 CDD:275368 5/18 (28%)
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 8/35 (23%)
COG5048 <258..416 CDD:227381 43/136 (32%)
C2H2 Zn finger 258..278 CDD:275368 6/19 (32%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 316..336 CDD:275368 8/19 (42%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..392 CDD:275368 5/18 (28%)
C2H2 Zn finger 400..420 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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