DRSC/TRiP Functional Genomics Resources

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Protein Alignment grau and ztf-23

DIOPT Version :9

Sequence 1:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_491096.1 Gene:ztf-23 / 171880 WormBaseID:WBGene00021846 Length:419 Species:Caenorhabditis elegans


Alignment Length:533 Identity:100/533 - (18%)
Similarity:168/533 - (31%) Gaps:223/533 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ESKVAEVLRQHFWFEVLPNDEISKVICNV-CWTQVSEFHQFYVSIQEAQVIYATTSKFKQDPEMV 90
            |.:..|.|..|.|...|.........|:. ..:.:|....|..:..:..::     :||::.|  
 Worm    16 EEQTMEHLESHIWSRHLQAFPFKCAYCDFPALSAISLMDHFAQNHSDVAIV-----EFKRNLE-- 73

  Fly    91 NTSWPEEV---LMPADVLAVDNDVGAQINVNPLDELDLSQPM-----------SPEDSKVGIKTE 141
                 :|.   .|.||.:|::.|..:|.:.:  .::.:.|||           .||.|:.....:
 Worm    74 -----DEKRFRKMVADSIAIEIDETSQQDSS--TQMTVLQPMMQQGTAQMILLPPEGSQYDEIVD 131

  Fly   142 RQSPDME---LLFEDANNEQDEDYEDDEDDDTDDLIVTRSGRKRKRDVAKPAKTKRGTVSVGRKG 203
            .:.||.:   :|.:|.|.|  |..:||:|||..|            ::..|       |.:|   
 Worm   132 HRGPDEDDFGVLDDDENIE--ELIDDDDDDDYID------------ELGNP-------VFIG--- 172

  Fly   204 KEKMVVKRGPPKRIFKMERLPPFCKEDEELIKRYIVMGCELCIFLAEDFD---GIRE----HFKD 261
                                   ..:|.:.|             |.:|..   .||.    |.| 
 Worm   173 -----------------------AHDDSDYI-------------LEDDLSPQGPIRSSNNYHLK- 200

  Fly   262 KHPDERPYIKCCGRKLNKRCLIQE---HARRHENPEYIKCKDCGKVFA----NSSVLRAHWLVHH 319
                   ||:.  |:::|  ||..   :|.:.::||...|...|..||    ||..:..      
 Worm   201 -------YIRT--RRMDK--LIDNVVVNATQRDSPEQEDCSTSGVAFADGQTNSGKMGR------ 248

  Fly   320 VPDEECDFQCEDCGKRFSRRNLLELHKGSHVPVNERKFICPQCPKHNAFATEYHMQVHISMQHRK 384
                   |.|:.|.:.|..::.|:.|:.:|:.|...:                            
 Worm   249 -------FSCDRCSRTFKYQSKLDEHRRTHLGVKPFQ---------------------------- 278

  Fly   385 AANICHVCGKKIKDKAVFEKHVRLHFEESGPRIKCPRPDCESWLKDEDNLKQHLRRHNDEGKLFI 449
                ||.|.::...:...:.|:|||..|        ||                         |:
 Worm   279 ----CHYCTRQFSQRGALKTHMRLHTGE--------RP-------------------------FV 306

  Fly   450 CSECGKSCKNSRALIGHKRYSHSNVIYTCEQCGKTFKKDISLKEHMAQHTGEPLYKCPFCPRTFN 514
            |.                           .:|||.|....:...|...|:||..|.|..|.::|.
 Worm   307 CQ---------------------------WECGKQFASSSAKSHHEKTHSGERPYICNVCGKSFT 344

  Fly   515 SNANMHSHKKKMH 527
            .|:::..|.|.:|
 Worm   345 KNSHVIRHLKNIH 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grauNP_788422.1 zf-AD 3..77 CDD:285071 9/50 (18%)
C2H2 Zn finger 272..290 CDD:275368 5/20 (25%)
COG5048 <296..453 CDD:227381 26/160 (16%)
C2H2 Zn finger 298..318 CDD:275368 6/23 (26%)
SIR2 <316..>415 CDD:294129 16/98 (16%)
C2H2 Zn finger 329..349 CDD:275368 5/19 (26%)
C2H2 Zn finger 359..409 CDD:275368 5/49 (10%)
C2H2 Zn finger 360..378 CDD:275370 0/17 (0%)
zf-C2H2_8 419..495 CDD:292531 8/75 (11%)
C2H2 Zn finger 450..471 CDD:275368 1/20 (5%)
C2H2 Zn finger 478..498 CDD:275368 5/19 (26%)
C2H2 Zn finger 506..524 CDD:275368 5/17 (29%)
ztf-23NP_491096.1 C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
zf-H2C2_2 264..288 CDD:290200 7/55 (13%)
C2H2 Zn finger 279..299 CDD:275368 5/19 (26%)
zf-H2C2_2 291..317 CDD:290200 13/85 (15%)
C2H2 Zn finger 307..328 CDD:275368 6/47 (13%)
zf-H2C2_2 324..344 CDD:290200 7/19 (37%)
C2H2 Zn finger 336..357 CDD:275368 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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