DRSC/TRiP Functional Genomics Resources

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Protein Alignment grau and jim

DIOPT Version :10

Sequence 1:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_061517149.1 Gene:jim / 1271212 VectorBaseID:AGAMI1_005882 Length:948 Species:Anopheles gambiae


Alignment Length:461 Identity:102/461 - (22%)
Similarity:163/461 - (35%) Gaps:129/461 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 ANNEQDEDYEDDEDDDTDDLIVTRSGRKRKRDVAKPAKTKRGTVSVGRKGKEKMVVKRGPPKRIF 218
            |.|:|.:..:..:...... ..|..|.....:....:.|..|..:.|...|.    .:....|:|
Mosquito   316 AGNQQQQQQQQQQQQQLHH-SPTNGGVAPNGNAGAGSTTAGGGGTTGGHAKS----SKNSDLRLF 375

  Fly   219 KMERLPPFCKEDEELIKRYIVMGCELCIFLAEDF---DGIREHFKDKHPDERPYIKC--CGRKLN 278
            |                         |:...:||   ..:.:| :..|.|.||| .|  ||::..
Mosquito   376 K-------------------------CLTCGKDFKQKSTLLQH-ERIHTDSRPY-GCPECGKRFR 413

  Fly   279 KRCLIQEHARRHENPEYIKCKDCGKVFANSSVLRAHWLVHHVPDEECDFQC--EDCGKRFSRRNL 341
            ::..:.:|.|.|.|.:...|..|.:.|...::|..|..:|   ..:..|.|  .:|||:|.::.:
Mosquito   414 QQSHLTQHLRIHANEKPFSCAYCPRSFRQRAILNQHVRIH---SGDKPFGCPYPECGKKFRQKAI 475

  Fly   342 LELHKGSHVPVNERKF--------ICPQ-----------CPK----------------------- 364
            |..|..:|..|:....        :.||           .||                       
Mosquito   476 LNQHVRTHQDVSPHLIFKNGPHATLWPQDVPYPPELENAQPKDEQAFGDEASQGGGESRGCFSPD 540

  Fly   365 -------------HNAF---------ATEYHMQVHISMQHRKAANI-----CHVCGKKIKDKAVF 402
                         |:.|         ||.....:...:||.::|.:     |.:|.|:.|.|:..
Mosquito   541 NYPAYFKDGKGVNHSIFGNNLQYLNKATGGKAMLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTL 605

  Fly   403 EKHVRLHFEESGPRIKCPRPDCESWLKDEDNLKQHLRRHNDEGKLFICSECGKSCKNSRALIGHK 467
            .:|..:|. ||.|   .|.|:|....:.:.:|.||||.|.:| |.|.|..|.:..:....|..|.
Mosquito   606 LQHGCIHI-ESRP---YPCPECGKRFRQQSHLTQHLRIHTNE-KPFGCMYCPRFFRQRTILNQHI 665

  Fly   468 RYSHSNVIYTCEQCGKTFKKDISLKEHMAQH-TGEPLYKCPF--CPRTF----------NSNANM 519
            |.......|.|.||||.|::...|.:|...| .|:..:.||.  |.|.|          :::.|.
Mosquito   666 RIHTGEKPYRCGQCGKDFRQKAILDQHTRTHQVGDRPFCCPMPNCRRRFGTEQEVKKHIDNHMNP 730

  Fly   520 HSHKKK 525
            ||.|.:
Mosquito   731 HSSKSR 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grauNP_788422.1 zf-AD 3..74 CDD:462262
C2H2 Zn finger 272..290 CDD:275368 5/19 (26%)
COG5048 <296..453 CDD:227381 50/227 (22%)
C2H2 Zn finger 298..318 CDD:275368 5/19 (26%)
C2H2 Zn finger 329..349 CDD:275368 7/21 (33%)
C2H2 Zn finger 359..409 CDD:275368 17/110 (15%)
C2H2 Zn finger 360..378 CDD:275370 8/73 (11%)
zf-C2H2_8 419..502 CDD:464935 28/83 (34%)
C2H2 Zn finger 450..471 CDD:275368 5/20 (25%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..524 CDD:275368 8/29 (28%)
jimXP_061517149.1 None
Blue background indicates that the domain is not in the aligned region.

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