DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grau and LOC1270274

DIOPT Version :10

Sequence 1:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_308956.5 Gene:LOC1270274 / 1270274 VectorBaseID:AGAMI1_010344 Length:797 Species:Anopheles gambiae


Alignment Length:222 Identity:54/222 - (24%)
Similarity:78/222 - (35%) Gaps:71/222 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 ENPEYIKCKDCGKVFANSSVLRAHWLVHHVPDEECDFQCEDCGKRFSRRNLLELHKGSHVPVNER 355
            ||.....|.:|||.:|.||.|..|...|...|.:...:|..|||.:.....|.:|..:|      
Mosquito   471 ENKAKYTCTECGKQYATSSNLSRHKQTHRSLDSQSAKKCHTCGKAYVSMPALAMHVLTH------ 529

  Fly   356 KFICPQCPKHNAFATEYHMQVHISMQHRKAANICHVCGKKIKDKAVFEKHVRLHFEESGPRIKCP 420
                                        |.::.|.||||...                       
Mosquito   530 ----------------------------KLSHSCGVCGKLFS----------------------- 543

  Fly   421 RPDCESWLKDEDNLKQHLRRHNDEGKLFICSECGKSCKNSRALIGHKRYSHSNVIYTCEQCGKTF 485
            ||    ||     |:.|||.|..| |.:.|:.|||:..:...|..|.:....:..|.|.:|.|||
Mosquito   544 RP----WL-----LQGHLRSHTGE-KPYGCAHCGKAFADRSNLRAHMQTHSIDKNYQCGRCHKTF 598

  Fly   486 KKDISLKEHMAQHTGEPLYKCPFCPRT 512
                :||.::.:|.....:|....|::
Mosquito   599 ----ALKSYLNKHLESACFKEDGAPQS 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grauNP_788422.1 zf-AD 3..74 CDD:462262
C2H2 Zn finger 272..290 CDD:275368
COG5048 <296..453 CDD:227381 36/156 (23%)
C2H2 Zn finger 298..318 CDD:275368 9/19 (47%)
C2H2 Zn finger 329..349 CDD:275368 6/19 (32%)
C2H2 Zn finger 359..409 CDD:275368 6/49 (12%)
C2H2 Zn finger 360..378 CDD:275370 0/17 (0%)
zf-C2H2_8 419..502 CDD:464935 26/82 (32%)
C2H2 Zn finger 450..471 CDD:275368 6/20 (30%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 506..524 CDD:275368 1/7 (14%)
LOC1270274XP_308956.5 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.