DRSC/TRiP Functional Genomics Resources

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Protein Alignment grau and PRDM5

DIOPT Version :9

Sequence 1:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001366033.1 Gene:PRDM5 / 11107 HGNCID:9349 Length:641 Species:Homo sapiens


Alignment Length:572 Identity:135/572 - (23%)
Similarity:214/572 - (37%) Gaps:142/572 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SIQEAQ-VIYATTSKFKQDPEMVNTSWPEEVLMPADVLAVDNDVGAQ------INVNPLDELDLS 126
            :|||.: :.|......:.|.|::             :..:|:|:.|:      :.|....|::.|
Human    98 AIQEGENIFYLAVEDIETDTELL-------------IGYLDSDMEAEEEEQQIMTVIKEGEVENS 149

  Fly   127 QPMSPEDSK--VGIKTERQSPDMELLF--ED--ANNEQDEDYEDDEDDD---------------- 169
            :..|....|  :|.|.:...|..|..|  ||  |.:.|....:..|:.:                
Human   150 RRQSTAGRKDRLGCKEDYACPQCESSFTSEDILAEHLQTLHQKPTEEKEFKCKNCGKKFPVKQAL 214

  Fly   170 -------TDDLIVTRSGRKRKRDVAKPA-----------KTKRGTV-------SVGRKGKEKMVV 209
                   |....:..|.|..:..|...:           :|.||..       |.|::.|.|..:
Human   215 QRHVLQCTAKSSLKESSRSFQCSVCNSSFSSASSFEQHQETCRGDARFVCKADSCGKRLKSKDAL 279

  Fly   210 KR-------GPPKR-------------------------IFK-MERLPPFCKEDEELIKRYIV-- 239
            ||       |.||:                         ||. .|.:..|...::  :||:::  
Human   280 KRHQENVHTGDPKKKLICSVCNKKCSSASSLQEHRKIHEIFDCQECMKKFISANQ--LKRHMITH 342

  Fly   240 ----------------MGCELCIFLAEDFDGIREHFKDKHPDERPYIKC--CGRKLNKRCLIQEH 286
                            ..||:|....:..|.:..| |..|.:::|| ||  ||:....|.:.:.|
Human   343 SDMRLSPLIFLIEKRPYNCEICNKSFKRLDQVGAH-KVIHSEDKPY-KCKLCGKGFAHRNVYKNH 405

  Fly   287 ARRHENPEYIKCKDCGKVFANSSVLRAHWLVHHVPDEECDFQCEDCGKRFSRRNLLELHKGSHVP 351
            .:.|......:|::|..:|.....|:.|.|:|   :.|..|:|..|...|.|::.|.:|.   ..
Human   406 KKTHSEERPFQCEECKALFRTPFSLQRHLLIH---NSERTFKCHHCDATFKRKDTLNVHV---QV 464

  Fly   352 VNER--KFICPQCPKHNAFATEYHMQVHISMQHRKAANICHVCGKKIKDKAVFEKHVRLHFEESG 414
            |:||  |:.|..|.|  ||.|...::.|......:...||..||:|.........|:|.|   :|
Human   465 VHERHKKYRCELCNK--AFVTPSVLRSHKKTHTGEKEKICPYCGQKFASSGTLRVHIRSH---TG 524

  Fly   415 PR-IKCPRPDCESWLKDEDNLKQHLRRHNDEGKLFICSECGKSCKNSRALIGHKRYSHSNVIYTC 478
            .| .:||.  ||......|.||.|:|.|..| |.:.||||.|:....|.|..|||.......:.|
Human   525 ERPYQCPY--CEKGFSKNDGLKMHIRTHTRE-KPYKCSECSKAFSQKRGLDEHKRTHTGEKPFQC 586

  Fly   479 EQCGKTFK-KDISLKEHMAQHTGEPLYKCPFCPRTFNSNANMHSHKKKMHPV 529
            :.|...|. |.:.::..|..:...||.:|.||.:.|..|..:..|...:|.|
Human   587 DVCDLAFSLKKMLIRHKMTHNPNRPLAECQFCHKKFTRNDYLKVHMDNIHGV 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grauNP_788422.1 zf-AD 3..77 CDD:285071 3/8 (38%)
C2H2 Zn finger 272..290 CDD:275368 5/19 (26%)
COG5048 <296..453 CDD:227381 50/159 (31%)
C2H2 Zn finger 298..318 CDD:275368 6/19 (32%)
SIR2 <316..>415 CDD:294129 29/100 (29%)
C2H2 Zn finger 329..349 CDD:275368 6/19 (32%)
C2H2 Zn finger 359..409 CDD:275368 14/49 (29%)
C2H2 Zn finger 360..378 CDD:275370 5/17 (29%)
zf-C2H2_8 419..495 CDD:292531 26/76 (34%)
C2H2 Zn finger 450..471 CDD:275368 10/20 (50%)
C2H2 Zn finger 478..498 CDD:275368 5/20 (25%)
C2H2 Zn finger 506..524 CDD:275368 6/17 (35%)
PRDM5NP_001366033.1 PR-SET_PRDM5 2..128 CDD:380967 7/42 (17%)
COG5048 <145..338 CDD:227381 35/194 (18%)
C2H2 Zn finger 169..190 CDD:275368 7/20 (35%)
C2H2 Zn finger 201..221 CDD:275368 0/19 (0%)
C2H2 Zn finger 236..256 CDD:275368 1/19 (5%)
COG5048 262..631 CDD:227381 101/386 (26%)
C2H2 Zn finger 264..287 CDD:275368 6/22 (27%)
C2H2 Zn finger 297..317 CDD:275368 0/19 (0%)
C2H2 Zn finger 322..342 CDD:275368 4/21 (19%)
C2H2 Zn finger 361..381 CDD:275368 6/20 (30%)
C2H2 Zn finger 389..409 CDD:275368 5/19 (26%)
C2H2 Zn finger 417..437 CDD:275368 6/19 (32%)
C2H2 Zn finger 445..462 CDD:275368 5/16 (31%)
C2H2 Zn finger 474..494 CDD:275368 7/21 (33%)
C2H2 Zn finger 502..522 CDD:275368 6/19 (32%)
C2H2 Zn finger 530..550 CDD:275368 9/21 (43%)
C2H2 Zn finger 558..578 CDD:275368 10/19 (53%)
C2H2 Zn finger 586..606 CDD:275368 5/19 (26%)
C2H2 Zn finger 615..636 CDD:275368 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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