DRSC/TRiP Functional Genomics Resources

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Protein Alignment grau and si:ch1073-127d16.1

DIOPT Version :9

Sequence 1:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_021323944.1 Gene:si:ch1073-127d16.1 / 101883863 ZFINID:ZDB-GENE-120214-30 Length:454 Species:Danio rerio


Alignment Length:328 Identity:92/328 - (28%)
Similarity:150/328 - (45%) Gaps:37/328 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 LAEDFDGIREHFKDKHPDERPY-IKCCGRKLNKRCLIQEHARRHENPEYIKCKDCGKVFANSSVL 311
            |.:..||   |.: .|..|:|| .:.|||...::.::.:|...|...:...|.:|||.|...:.|
Zfish   121 LKQSLDG---HLR-IHTGEKPYTCQVCGRSFREKQILDKHLTIHTGEKPYSCPECGKSFRVKNCL 181

  Fly   312 RAHWLVHHVPDEECDFQCEDCGKRFSRRNLLELHKGSHVPVNERKFICPQCPKHNAFATEYHMQV 376
            ..|..:|   ..|..:.|::|||.|:.:..||.|...|  ..|:.|.||:|.:  :|..:..:::
Zfish   182 ENHIKIH---TGEKPYTCQECGKSFTEKQNLERHIRIH--TGEKPFACPECGR--SFRVKQDLKI 239

  Fly   377 HISMQHRKAANICHVCGKKIKDKAVFEKHVRLHFEESGPRIKCPRPDCESWLKDEDNLKQHLRRH 441
            |:.:...:....|..|||...:....|.|:|:|..|. |.: |..  |....:.:.||:.|:|.|
Zfish   240 HLRIHTGEKPFSCQQCGKSFSENKKLENHMRIHTGEK-PFV-CSH--CGKNFRGKQNLESHMRLH 300

  Fly   442 NDEGKLFICSECGKSCKNSRALIGHKRYSHSNVIYTCEQCGKTFKKDISLKEHMAQHTGEPLYKC 506
            .. .:.:.|.:||||....::|..|.|.......:.|:||||:|.:..:||.|:..||||..:.|
Zfish   301 TG-NQPYTCPQCGKSYNQQKSLQIHIRTHTGEKPFACDQCGKSFTQQSTLKGHIKIHTGEKPFTC 364

  Fly   507 PFCPRTFNSNANMHSHKKKMHPVE-----------------WDIWRKTKTGSSQKVLPSAQVAQM 554
            |.|.::|.....:..| ||:|..|                 .||..:..||  :|:....|..:.
Zfish   365 PQCGKSFIEKTKLERH-KKIHSGEKAYTCQHCKKSFTLKQSLDIHMRIHTG--EKLYTCQQCGKS 426

  Fly   555 FRD 557
            |.:
Zfish   427 FTE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grauNP_788422.1 zf-AD 3..77 CDD:285071
C2H2 Zn finger 272..290 CDD:275368 4/17 (24%)
COG5048 <296..453 CDD:227381 43/156 (28%)
C2H2 Zn finger 298..318 CDD:275368 7/19 (37%)
SIR2 <316..>415 CDD:294129 27/98 (28%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
C2H2 Zn finger 359..409 CDD:275368 12/49 (24%)
C2H2 Zn finger 360..378 CDD:275370 3/17 (18%)
zf-C2H2_8 419..495 CDD:292531 23/75 (31%)
C2H2 Zn finger 450..471 CDD:275368 8/20 (40%)
C2H2 Zn finger 478..498 CDD:275368 9/19 (47%)
C2H2 Zn finger 506..524 CDD:275368 5/17 (29%)
si:ch1073-127d16.1XP_021323944.1 COG5048 36..445 CDD:227381 92/328 (28%)
C2H2 Zn finger 56..76 CDD:275368
C2H2 Zn finger 84..104 CDD:275368
C2H2 Zn finger 112..132 CDD:275368 4/14 (29%)
C2H2 Zn finger 140..160 CDD:275368 4/19 (21%)
C2H2 Zn finger 168..188 CDD:275368 7/19 (37%)
C2H2 Zn finger 196..216 CDD:275368 8/19 (42%)
C2H2 Zn finger 224..244 CDD:275368 5/21 (24%)
C2H2 Zn finger 252..272 CDD:275368 7/19 (37%)
C2H2 Zn finger 280..300 CDD:275368 6/21 (29%)
C2H2 Zn finger 308..328 CDD:275368 8/19 (42%)
C2H2 Zn finger 336..356 CDD:275368 9/19 (47%)
C2H2 Zn finger 364..384 CDD:275368 7/20 (35%)
C2H2 Zn finger 392..412 CDD:275368 2/19 (11%)
C2H2 Zn finger 420..440 CDD:275368 2/10 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D448547at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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