Protein Alignment cpo and WHI4

DIOPT Version :9

• Sequence 1: NP_001014632.3
• Gene: cpo / 45840
• FlyBaseID: FBgn0263995
• Length: 962
• Species: Drosophila melanogaster
• Sequence 2: NP_010057.1
• Gene: WHI4 / 851302
• SGDID: S000002383
• Length: 649
• Species: Saccharomyces cerevisiae
• Alignment Length: 619
• Identity: 125/619 - (20%)
• Similarity: 203/619 - (32%)
• Gaps: 234/619 - (37%)

  Fly   402 SSSSSNSNSNAIMENQMALAPLGLSQSM-------------DSVNT-ASNEEEV--RTLFVSGLP 450
            |:..|||.:|...||....|...:..||             :.||: |.::.:|  ..|.:..||
Yeast    45 SAVRSNSETNIKRENPQGFAKEPIMTSMLHNLTMSTGKGNGNDVNSLAPHDVDVGPYCLLLRNLP 109

  Fly   451 MDAKPRELYLLFRAYEGYE-----------------------GSLLKVT-------SK------- 478
            .|...||.|.:|....|..                       |||..||       ||
Yeast   110 KDITLRECYCIFSLATGVSSIELKRDDREPFNDNEKVVVVKFGSLSLVTHYANILNSKSEIFGPS 174

  Fly   479 ----------NGKTASPVGFVTFHTRAG-----------AEAAKQDLQGVRFDPDMPQTIRLEFA 522
                      |.:|..||.|.. |..:|           :.:|:.::|...|:       .:.:.
Yeast   175 FPFRSHIDVVNEQTQLPVSFQE-HVSSGTTNSSPKNYQLSSSAQNEIQNQSFN-------TISYG 231

  Fly   523 KSNTKVSKP---KPQP----------------------------------------NTATTASHP 544
            |:::....|   ||:|                                        :..||...|
Yeast   232 KTSSSPLGPSAAKPRPSLLSERSLRFSFNDPFGLETISQRKESVPFLRNSISQHDLSNVTTTPVP 296

  Fly   545 ALMHP-------------------------LTGHLGGPFFPGGPELWHHPLA------YSAAAAA 578
            |.|.|                         |...:|...|  |..|...|::      ::|::.|
Yeast   297 AGMPPQKDAGKSLLLLEKDEINESIWNGDELVNDVGNSSF--GASLQEPPMSSTPVMEWNASSTA 359

  Fly   579 ELP----GAAALQHATLVHPALH---PQVP-VRSYLXLNTDKVMEQPMHQTQMTMPPHHQTTAIH 635
            .:|    .:.....:.|:.|:.|   ..|| ::|.. ||...|:     .:..::|.:|....|:
Yeast   360 NIPLFQLSSQENHQSNLLPPSHHSISQDVPHIQSQPNLNNSGVI-----HSATSLPHYHLLNQIN 419

  Fly   636 PGAAMAHMAAAAAAAAAGGGGGAATAAAAPQSAAATAAA-----------------AAAASHHHY 683
            .......:..:.:...:.......|....|||:|...::                 .:..|....
Yeast   420 ASTKTQSIQQSVSNVPSNLDLNLQTENGHPQSSAPNGSSIFNNQKVNQGFLVSEQDTSTISRQKE 484

  Fly   684 LSSPALASPAGSTNNASH--------------------PGNPQIAANAPCSTLFVANLGQFVSEH 728
            .||.|.|| |.|.||.::                    |.|| ...|.||:||:|.||....:|.
Yeast   485 CSSTASAS-AFSKNNETNVAGSTTISQADLSLLAKVPPPANP-ADQNPPCNTLYVGNLPPDATEQ 547

  Fly   729 ELKEVFSSMPGFCRLRMHTKAMATATGSSCSTSNGSGSSSNSNHNSAAVQQHPVAFIEFKDPPTA 793
            ||:::||:..||.||....|            .|..|..:...|.       |:.|:||:|...|
Yeast   548 ELRQLFSNQQGFRRLSFRNK------------MNSHGHGNGHGHG-------PICFVEFEDVSFA 593

  Fly   794 SQAMQQLQGKYL-----LSSDRGSIRIEFARSKM 822
            ::|:.:|.|..|     ..:::|.||:.|:::.:
Yeast   594 TRALAELYGSQLPHPRPSLNNKGGIRLSFSKNPL 627

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cpo	NP_001014632.3	RRM	<428..>525	CDD:223796	33/170 (19%)
		RRM_cpo	441..523	CDD:241128	27/141 (19%)
		RRM_scw1_like	712..819	CDD:240691	34/111 (31%)
WHI4	NP_010057.1	RRM_scw1_like	531..624	CDD:409691	34/111 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	72	1.000	Inparanoid score	I1681
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050