Protein Alignment cpo and AT3G13700

DIOPT Version :9

• Sequence 1: NP_001014632.3
• Gene: cpo / 45840
• FlyBaseID: FBgn0263995
• Length: 962
• Species: Drosophila melanogaster
• Sequence 2: NP_187983.1
• Gene: AT3G13700 / 820579
• AraportID: AT3G13700
• Length: 296
• Species: Arabidopsis thaliana
• Alignment Length: 411
• Identity: 100/411 - (24%)
• Similarity: 136/411 - (33%)
• Gaps: 185/411 - (45%)

  Fly   441 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTA---------------SPVGFVT 490
            :.||||||||.|.|.||::.|||...|:|...||.|.:..:..               :.|.|.|
plant    36 INTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYTGRGDQVCKNLQFLFFFIPIFRKAVVAFAT 100

  Fly   491 FHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSKPKPQPNTATTASHPALMHPLTGHLG 555
            |.:...|.||..:|.||:|||.....:.:|.|:||   |:.|.:|.:
plant   101 FTSHRFALAAMNELNGVKFDPQTGSNLHIELARSN---SRRKERPGS------------------ 144

  Fly   556 GPFF--------------------PGGPELWHHPLAYSAAAAAELPGAAALQHATLVHPALHPQV 600
            ||:.                    ...|:            ..:.||
plant   145 GPYVVIDNRNKEISKSQDDQSDEGDSDPD------------EVQEPG------------------ 179

  Fly   601 PVRSYLXLNTDKVMEQPMHQTQMTMPPHHQTTAIHPGAAMAHMAAAAAAAAAGGGGGAATAAAAP 665
                    |:|.             |..:.||                         .:.|.:.|
plant   180 --------NSDS-------------PKENDTT-------------------------KSEADSEP 198

  Fly   666 QSAAATAAAAAAASHHHYLSSPALASPAGSTNNASHPGNPQIAANAPCSTLFVANLGQFVSEHEL 730
            .|.|.:|                    .|....||..|:   .|.| |||||:||||...:|.||
plant   199 DSKAPSA--------------------NGHLEKASEGGS---GARA-CSTLFIANLGPNCTEDEL 239

  Fly   731 KEVFSSMPGFCRLRMHTKAMATATGSSCSTSNGSGSSSNSNHNSAAVQQHPVAFIEFKDPPTASQ 795
            |::.|..|||..|::.      |.|..                       ||||.:|::...|:.
plant   240 KQLLSRYPGFHILKIR------ARGGM-----------------------PVAFADFEEIEQATD 275

  Fly   796 AMQQLQGKYLLSSDRGSIRIE 816
            ||..|||..|.|||||.:.||
plant   276 AMNHLQGNLLSSSDRGGMHIE 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cpo	NP_001014632.3	RRM	<428..>525	CDD:223796	35/98 (36%)
		RRM_cpo	441..523	CDD:241128	34/96 (35%)
		RRM_scw1_like	712..819	CDD:240691	39/105 (37%)
AT3G13700	NP_187983.1	RRM	<37..>166	CDD:223796	42/149 (28%)
		RRM_RBPMS_like	37..130	CDD:240866	33/92 (36%)
		RRM	123..>282	CDD:223796	57/308 (19%)
		RRM_scw1_like	221..296	CDD:240691	38/104 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1457
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002113
OrthoInspector	1	1.000	-	-		otm2712
orthoMCL	1	0.900	-	-		OOG6_104919
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1401
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	7	6.670