Protein Alignment cpo and scw1

DIOPT Version :9

• Sequence 1: NP_001014632.3
• Gene: cpo / 45840
• FlyBaseID: FBgn0263995
• Length: 962
• Species: Drosophila melanogaster
• Sequence 2: NP_587917.1
• Gene: scw1 / 2539358
• PomBaseID: SPCC16C4.07
• Length: 561
• Species: Schizosaccharomyces pombe
• Alignment Length: 623
• Identity: 134/623 - (21%)
• Similarity: 198/623 - (31%)
• Gaps: 226/623 - (36%)

  Fly   293 SSSSKHNSNNNSNTSAGAASAAVPIATSVAAVPTTGGSLPDSPAHESHSHESNSATASAPTTPSP 357
            ||.:|..........|...|:.||          ||....|...|..|.              ||
pombe    16 SSKTKVGDETEFTEDALRGSSLVP----------TGILNGDDECHALHM--------------SP 56

  Fly   358 AGSVTSAAPTATATAAAAGSAAATAAATGTPATSAVSDSN-------NNLNSSSSSNSNSNAIME 415
                           .|..|.|..|.:.|.|..::|..|.       :|||.
pombe    57 ---------------QAIHSQAGKAESDGLPTYASVEKSTTPIGRLLSNLNG------------- 93

  Fly   416 NQMALAPLGLSQSMDSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNG 480
                    ||:.:...|....  .....|.:..||.|..|||....|..........|...|.:.
pombe    94 --------GLASAPPKVGFGF--PRYYALRIEDLPRDLTPREFLCTFLFATNVVSVELNPVSVDN 148

  Fly   481 KTASPVGFVTFHTRAGAEAAKQDL---------------------------------QGVRFD-- 510
            :.|.  |...|.:|..|.:|:..|                                 ..|.|:
pombe   149 EVAH--GLAVFSSRDAAASARDTLLSSDVYSACSMIILDNYRKGSQTNLSDETEGSESSVSFNRL 211

  Fly   511 -----PDMPQTIRLE-FAKSNTKVSKPKPQPNTATTASH--PALMHPLTGHLGGPFFP----GG- 562
                 |..|.....: |.:|:..||...|      ||:|  .|..|..| .||...|.    ||
pombe   212 SRNHSPTRPLLGNRDLFRRSSNHVSASMP------TANHSESAYRHSKT-PLGDSTFQAPNNGGS 269

  Fly   563 ---PELW-----HHPLAYSAAAAAELPGAAALQHATLVHPALHPQVPVRSYLXLNTDKVMEQPMH 619
               ..||     .:||..:...|.:..|:          |...| .|.:|.. |..|.|
pombe   270 LHSDRLWSSFPVSYPLTLANVLAKDEVGS----------PTWSP-TPSKSSTNLRQDGV------ 317

  Fly   620 QTQMTMPP--HHQTTAIHPGAAMAHMAAAAAAAAAGGGGGA------------------------ 658
                  ||  ...:.:|:...|..::::....:|......|
pombe   318 ------PPILRFNSLSINTNVARNYLSSEKGYSAHTQNSSAQSPHPRVFSANSAFSTTSPPPLTP 376

  Fly   659 ATAAAAPQSAA----ATAAAAAAASHHHYLSSPALASPAGSTNNASHPGNPQIAANAPCSTLFVA 719
            :|:...|.||:    :|..:|.::||..:...||      ||...::|.:    .|.||:|::|.
pombe   377 STSRDYPFSASTISPSTPFSAYSSSHGIHQRIPA------STPTNTNPAD----QNPPCNTIYVG 431

  Fly   720 NLGQFVSEHELKEVFSSMPGFCRLRMHTKAMATATGSSCSTSNGSGSSSNSNHNSAAVQQHPVAF 784
            ||....||.|||.:||:..|:.||              |..:.|:|               |:.|
pombe   432 NLPPSTSEEELKVLFSTQVGYKRL--------------CFRTKGNG---------------PMCF 467

  Fly   785 IEFKDPPTASQAMQQLQGKYLLSSDRGSIRIEFARSKM 822
            :||::.|.|.:|::.|||..|.||.:|.||:.|:::.:
pombe   468 VEFENIPYAMEALKNLQGVCLSSSIKGGIRLSFSKNPL 505

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cpo	NP_001014632.3	RRM	<428..>525	CDD:223796	23/137 (17%)
		RRM_cpo	441..523	CDD:241128	22/122 (18%)
		RRM_scw1_like	712..819	CDD:240691	36/106 (34%)
scw1	NP_587917.1	RRM	347..>485	CDD:223796	42/176 (24%)
		RRM_scw1_like	424..502	CDD:240691	36/106 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	2	1.870