DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bel and Ddx41

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_598820.2 Gene:Ddx41 / 72935 MGIID:1920185 Length:622 Species:Mus musculus


Alignment Length:630 Identity:212/630 - (33%)
Similarity:301/630 - (47%) Gaps:142/630 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 GGSGSNLNEQTAED------------------------GQAQQQQQ-----PRNDRWQEPERPAG 210
            |||.|...::..||                        |..:::||     ||.|   |.:.|. 
Mouse    19 GGSRSEDEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGATEEEQQDSGSEPRGD---EDDIPL- 79

  Fly   211 FDGSEGGQSAGGNRSYNNRGERGGGGYNSRWKEGGGSNVDYTKLGARDERLEVE----------- 264
                 |.||   |.|..::        :...||    ..:..|..|::::|:.|           
Mouse    80 -----GPQS---NVSLLDQ--------HQHLKE----KAEARKESAKEKQLKEEEKILESVAEGR 124

  Fly   265 -LFGVGN--TGINFD--------------------------KYEDIPVEATGQNVPPNITSFDDV 300
             |..|..  .||.:|                          ||. |.||  |..:||.|.||.::
Mouse   125 ALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYH-ILVE--GDGIPPPIKSFKEM 186

  Fly   301 QLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPP 365
            :....|...:.......|||:|...||.|::|||::..|.||||||..|.:|::....|      
Mouse   187 KFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLE------ 245

  Fly   366 PQSTRQYSRRKQYPLGLVLAPTRELATQ---IFEEAKKFAYRSR---------MRPAVLYGGNNT 418
             |..|....:::.|.||::.|:||||.|   |.|      |..|         :|.|:..||.:.
Mouse   246 -QEKRLPFSKREGPYGLIICPSRELARQTHGILE------YYCRLLQEDSSPLLRCALCIGGMSV 303

  Fly   419 SEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMP 483
            .|||..:..|.|::|||||||.|::.:..|.|:..|:|.|||||||:|||||..||.|.....  
Mouse   304 KEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK-- 366

  Fly   484 PTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLS 548
              ||||||:||||.||:||..|...|...:.:.|||.|:.|.::.|.:.:|.|..|..|||:.|.
Mouse   367 --GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQ 429

  Fly   549 SIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPIL 613
              :..|.      .|||.|.|...|::.|:|........:|||.:.|:||.:|:..||.|...:|
Mouse   430 --KTPPP------VLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVL 486

  Fly   614 VATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEK-NRNICSDLLEL 677
            |||.||::|||.|.::||||:|:|.::|.||||||||||.||.|:||:|.|:. :.::..||..|
Mouse   487 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKAL 551

  Fly   678 LIETKQEIPSFMEDMSSDRGHGGAKRAGRGGGGR---YGGGFGSR 719
            |:|.||::|..::.:     |.|.:.....||.|   :.||.|.|
Mouse   552 LLEAKQKVPPVLQVL-----HCGDESMLDIGGERGCAFCGGLGHR 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 103/284 (36%)
SF2_C_DEAD 527..663 CDD:350174 59/135 (44%)
Ddx41NP_598820.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..84 11/44 (25%)
Q motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00552 181..209 6/27 (22%)
DEADc_DDX41 192..397 CDD:350709 88/221 (40%)
DEAD box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 344..347 2/2 (100%)
SF2_C_DEAD 408..536 CDD:350174 59/135 (44%)

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