DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bel and DDX43

DIOPT Version :10

Sequence 1:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster
Sequence 2:XP_047274937.1 Gene:DDX43 / 55510 HGNCID:18677 Length:653 Species:Homo sapiens


Alignment Length:583 Identity:199/583 - (34%)
Similarity:284/583 - (48%) Gaps:100/583 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 DSRRGGDWNRSG------GGGGGGRGFGRGPSYRGGG-------------------GGSGSNL-N 182
            :.|...:.||:|      |.||..||..|.|.....|                   |..||.: |
Human    28 ERRPAEELNRTGPEGYSVGRGGRWRGTSRPPEAVAAGHEELPLCFALKSHFVGAVIGRGGSKIKN 92

  Fly   183 EQTAEDGQAQ-QQQQPRN-----------------------------------DRWQEPERPAGF 211
            .|:..:...| .|:||.:                                   |...:|.  .|.
Human    93 IQSTTNTTIQIIQEQPESLVKIFGSKAMQTKAKAVIDNFVKKLEENYNSECGIDTAFQPS--VGK 155

  Fly   212 DGSEGGQSAGGNR---SYNNRGERGGGGYNSRWKEGGGSNVDYTKLGARD---ERLEVELFGVGN 270
            |||.......|:|   .::...|.|.....::|.:......::.|.....   .::|.:.:...|
Human   156 DGSTDNNVVAGDRPLIDWDQIREEGLKWQKTKWADLPPIKKNFYKESTATSAMSKVEADSWRKEN 220

  Fly   271 TGINFDKYEDIPVEATGQNVP-PNIT-SFDDV-QLTEIIRNNVALARYDKPTPVQKHAIPIIING 332
            ..|.:|..:|      |:..| ||.| :|||. |....:..|:..|.:.||||:|..|.||::.|
Human   221 FNITWDDLKD------GEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQG 279

  Fly   333 RDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEE 397
            .||:..||||:|||..:|:|....:     |..|....|.:|    |..|||.||||||.|:..|
Human   280 IDLIGVAQTGTGKTLCYLMPGFIHL-----VLQPSLKGQRNR----PGMLVLTPTRELALQVEGE 335

  Fly   398 AKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEAD 462
            ..|::|:. :|...:|||.|..||:.||.:|..:|:||||||.|:.....|.|:||.:|||||||
Human   336 CCKYSYKG-LRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEAD 399

  Fly   463 RMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTS-EN 526
            :||||||||||.:|:  |::.|  .|||:|.|||:|..:..||..:|...:.:.||.:...: .:
Human   400 KMLDMGFEPQIMKIL--LDVRP--DRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSS 460

  Fly   527 ITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHG 591
            :.|.|:...|.:|.|::...|.|:      :.....::||..|..||.|...|...|..|.|:||
Human   461 VKQNIIVTTEEEKWSHMQTFLQSM------SSTDKVIVFVSRKAVADHLSSDLILGNISVESLHG 519

  Fly   592 DRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 654
            ||.|::||:||..|::|...||:||.:|:||||:..|.||.|||.|.::||||||||||||.|
Human   520 DREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAG 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 106/249 (43%)
SF2_C_DEAD 527..663 CDD:350174 57/128 (45%)
DDX43XP_047274937.1 KH-I_DDX43_DDX53 69..134 CDD:411858 9/64 (14%)
SrmB 242..>582 CDD:440279 155/359 (43%)

Return to query results.
Submit another query.